Sphingomonas sp. LK11: AV944_00305
Help
Entry
AV944_00305 CDS
T04954
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K24073
RNA polymerase sigma factor CnrH
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splk03021
]
AV944_00305
Transcription machinery [BR:
splk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AV944_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_1
HTH_24
HTH_28
HTH_AsnC-type
HTH_23
KORA
Motif
Other DBs
NCBI-ProteinID:
APX64543
LinkDB
All DBs
Position
complement(66473..67036)
Genome browser
AA seq
187 aa
AA seq
DB search
MGERDLAGLADGDLVALAIGGRPGAYAAIVTRHKAALYRLILAQVRDADEALDLVQESFV
AAHGALGRFDQTRSLRAWLSRIALNKCRDWARRRRVRAMLARVLPVEAAAEVADDRIGGE
AAAIERDSLARTLAALDALPAALREPLILCAVEGLSQAEAAEALGLSSKAVELRIRRARA
ALREQIG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagcgcgatctggcggggctggcggacggcgatctggtcgcgctggcgatcggc
gggcggccgggcgcctatgccgcgatcgtcacgcgccacaaggcggcgctttatcgcctg
atcctggcgcaggtccgcgacgccgacgaggcgctggatctggtgcaggagagttttgtc
gcggcgcatggcgcgctgggccggttcgaccagacgcggtccctgcgggcttggctcagc
aggatcgcgctcaacaaatgccgggactgggcgcgacggcggcgggtgcgcgcgatgctg
gcgcgggttctgccggtcgaggcggcggcagaggtcgccgacgaccggatcgggggcgag
gcggcggcgatcgagcgggattcgctggcccgcacattggccgcgctcgatgccttgccc
gccgcgttgcgcgagccgctgatcctctgtgcggtcgagggattgagccaggccgaggcg
gccgaggcgctgggcctgagcagtaaggcggtcgagcttcgcatacgccgcgcccgtgcc
gccttgcgcgagcagatcgggtga
DBGET
integrated database retrieval system
