Sphingomonas sp. LK11: AV944_00730
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Entry
AV944_00730 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_00730
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_00730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MBD_C
Motif
Other DBs
NCBI-ProteinID:
APX64619
LinkDB
All DBs
Position
complement(133677..136061)
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AA seq
794 aa
AA seq
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MSHSFIALSCVGFLATAPHVAAAETGPRADSAPPPAAVAKSQDSTGARDVIVTGQRGTGA
AVLESPKATAALLDTPQTITVVSEQTIRKQNLQTLRDVLQTLPGITFGAGEGGGGYGDSI
NLRGYSASNDITIDGVRDSAQYSRTDPFNLQQVEVYNGANSVFNGSGSVGGTINLVSKVP
TPETLTIMQGSVGTDNYYRGAIDSNVRVSDLVAVRLNGAYHHNDVPGRDVEKMQRWGIAP
SVTIGIGGPTSLTLAYVHQEDRNTPVYGIPWFDNGLVDGFVPGAKRSSYFGIANLDRQDS
TVDRFTATFRHQIDEHWSVRNLTRWQQVTQDSVTSAPQGTFCLAATNRQPVTATPGAAIG
AACPANLPAGFYQPSGPRGLVRDQQNQMLTNQIDLRHEAGAKGGLHNVLNIGMSGMIENY
RITQGSLLRNADGSVVAQPVINIANPNTNYTGPINFVATAQSRSETRNLAVYAFDTLALN
HFFELNGGVRWEYQEANFRALPLAAANAGQLAYQPQVSREKLFSWRAGAVFHPVENVSVY
AGYGNAKTPSSTTVRLGCGVPSTATAANPCAVAPETAKNYEAGVKAGLFGRRLELTAAVF
RNERTNYRVPSNDPALPVGLQVLDGRSRVDGIALGASGSITPAWTIFANYTYLDGKVLQS
ISNRDKAAGVLDPQAGAELVQTPEHSGSLFTTYKLPFGLEVGYGLTYQGSFATNFPVAGN
RVQFHVDDYLIHRAFLAYTIAQRWTMQLNVQNFTDEKYVTGVRNNINGTTGNITGGWAIP
GDRRQATLSLFYNF
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattcgttcatcgcattgtcgtgcgtgggctttctggccaccgcgccgcatgtc
gccgccgcagagaccggcccccgcgccgacagcgcgccgccgcccgccgctgtggccaag
tcccaggattcgactggcgcgcgcgacgtgatcgtcaccggccagcgcggcaccggcgcc
gcggtcctggagagcccgaaggccaccgccgcgctgctcgacacgccgcagacgatcacc
gtggtcagcgagcagaccatccggaagcagaatctccagacgcttcgcgacgtgctccag
acgctgccggggatcaccttcggcgcgggcgagggcggcggcggttacggcgactcgatc
aacctgcgcggctattcggccagcaacgacatcaccatcgacggcgtccgcgacagcgcg
cagtacagccgcaccgacccgttcaacctgcaacaggtcgaggtctacaacggcgcgaac
agcgtcttcaacggatcgggttcggtcgggggcacgatcaacctcgtctccaaggtgccc
acgcccgagacgctgacgatcatgcagggctcggtcggcacggacaattattatcgtggt
gcgatcgacagcaatgtccgcgtgtcggatctggtcgcggtgcgcctgaacggcgcatac
caccataacgacgtgcccggccgcgatgtcgagaagatgcagcgctggggcatcgcgccc
tcggtcacgatcggcattggcgggccgaccagcctgactctggcctatgtccatcaggag
gatcgcaacacgccggtttacggcatcccctggttcgacaatggcctggtcgatggcttc
gtgccgggggccaagcgctccagctatttcgggatcgccaatctcgaccggcaggacagt
acggtagaccgcttcaccgcgaccttccgccaccagatcgacgagcattggagcgtgcgc
aacctgacccgctggcagcaggtgacgcaggatagcgtcacctccgcgccgcaggggacc
ttctgtctcgccgcgaccaatcgccagccggtgacggcgacgccgggggccgcgatcggt
gcggcatgcccggccaatcttccggcgggcttctaccagccttcgggcccgcgcggactg
gtgcgcgatcagcagaaccagatgctgaccaaccagatcgacctgcgccatgaggcaggc
gcgaagggcggcctccacaatgtcctgaacatcggcatgtcgggcatgatcgagaattac
cggatcacccaaggctcgctgctgcgcaatgccgatggcagcgtggtggcacagcccgtg
atcaacatcgccaacccgaacaccaattataccggcccgatcaacttcgtagccaccgcc
cagtcgcgcagcgagacgcgcaacctggccgtctatgccttcgacacgctggccctgaac
cacttcttcgagctgaacggcggcgtgcgttgggaatatcaggaagcgaatttccgcgcc
ctgccgctggccgcggccaatgcgggtcagctcgcctatcagcctcaggtcagccgcgag
aagctgttctcctggcgggcgggcgcggtgttccacccggtcgagaatgtcagcgtctat
gcgggctatggcaatgccaagacgccgtcctcgacgaccgtccggctgggctgcggcgtg
ccgtcgaccgcgaccgccgccaacccctgcgccgtggcaccggaaaccgcgaagaactac
gaggcgggggtgaaggccgggctgttcggccgtcgcctggagctgaccgccgccgtcttc
cgcaacgagcggaccaattaccgcgtgccctccaacgatccggcactgccggtgggcttg
caggtgctggacggacgcagccgggtggacggcatcgcgctgggtgcgtcgggatcgatc
accccggcctggacgatctttgccaactatacctatctcgacggcaaagtgctgcagagc
atctcgaaccgcgacaaggcggcgggcgtgctcgatccgcaggcgggcgccgaactggtc
cagacgcccgagcattcgggcagcctgttcaccacctacaagctgcctttcggcctggag
gtcggttacggcctgacctatcagggatcgttcgcgaccaacttccccgtcgcagggaat
cgggtgcagttccatgtggacgattatctgatccaccgcgccttcctggcctataccatt
gcccagcgctggacgatgcagctcaacgttcagaacttcaccgacgagaaatacgtcacg
ggcgtgcgcaacaatatcaacggcacgaccggcaacatcaccggcggctgggcgatcccc
ggcgaccggcgtcaggcgacgctgagcctgttctacaatttctga
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