Sphingomonas sp. LK11: AV944_01025
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Entry
AV944_01025 CDS
T04954
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00300
Lysine biosynthesis
splk00470
D-Amino acid metabolism
splk01100
Metabolic pathways
splk01110
Biosynthesis of secondary metabolites
splk01120
Microbial metabolism in diverse environments
splk01230
Biosynthesis of amino acids
Module
splk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AV944_01025
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AV944_01025
Enzymes [BR:
splk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AV944_01025
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GFIT
Motif
Pfam:
DAP_epimerase
SpaA_2
SpaA
Motif
Other DBs
NCBI-ProteinID:
APX64661
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Position
215015..215950
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AA seq
311 aa
AA seq
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MRFAIVKCHGSGNDFPMIDARDLSLSEAEWAGVARALADRAGPVGGDGLLLLVPGDERAA
FGMVMRNSDGSEAETCLNGVRCVARAGFEALGIAAATVRLKTSHADAVHDADLAPGVYTV
RETAGPAGLSTAAWPIHGAPERLVEAVLPMLDADKCFTAVTMPNPHLVHFVETVDEAELV
RLGEICEAAPDWLPNRANVSFVEVRGDSLFVRTFERGVGLTDSCGSAMAASTYAACLTGR
IAWDAPTVVFNRGGLVRAFAGEDGMVTLSGNATYEWAGSVTVDLASETARDMVVERRFPE
EIAAWEAAKRG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcgcgatcgtcaaatgccatggatcgggcaatgatttcccgatgatcgacgcc
cgcgacctgtcgctttccgaggccgaatgggcgggcgtcgcgcgtgcgctggccgaccgg
gcggggccggtgggcggcgacgggctgctgctgctggtcccgggtgacgaacgcgcggcg
ttcggcatggtgatgcgcaacagcgatggcagcgaggcggagacctgcctcaacggcgtg
cgttgcgtcgcgcgcgcggggttcgaggcgctggggatcgcggcggccaccgtacgactg
aagacatcgcacgccgatgcggtccacgatgccgacctcgcacccggcgtctatacggtg
cgcgagacggcgggccctgccggactgtcgaccgccgcctggccgatccatggtgccccc
gagcgactggtcgaggcggtgctgcccatgctcgatgcggacaagtgcttcaccgccgtc
accatgcccaacccgcatctcgtccatttcgtcgagacggtggacgaagccgaactcgtc
cgcctgggcgaaatctgcgaggcggcgcccgactggctgcccaaccgcgccaatgtgtcc
ttcgtcgaggtgcgcggggactcgctgttcgtccgtaccttcgagcgcggtgtgggcctg
accgacagctgcggcagcgcgatggcggcgtcgacctatgccgcatgcctgaccgggcgg
atcgcctgggacgcgccgaccgtggtgttcaatcgcggcggcctggtccgcgcctttgcg
ggcgaggacgggatggtcacgctgtcgggcaatgcgacctatgaatgggcggggtcggtg
acggtcgacctggccagcgaaacggcgcgtgacatggtggtggagcgacgcttccccgag
gagatcgccgcctgggaggccgccaagcgggggtaa
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