Sphingomonas sp. LK11: AV944_01125
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Entry
AV944_01125 CDS
T04954
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AV944_01125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_01125
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AV944_01125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_22
AAA_16
AAA_29
AAA_27
AAA_15
SbcC_Walker_B
ABC_tran
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APX67353
LinkDB
All DBs
Position
complement(237190..238233)
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AA seq
347 aa
AA seq
DB search
MLTRLVLTDFRNHADLALSPAAGFVVLTGENGAGKTNVLEAVSLLAPGRGLRRAALSAMA
RQGGKGGFGVAATLDGDVEIATGALASAPERRVVRVQGAATSANALADWLSVLWLTPTMD
RLFVEPASERRRFLDRLVLALAPAHGMHATRYDAAMRERNRLLASDGPVDPDWLSALEAR
MVEHGAALDAARVAAVAALDQRLEEAPDSVFARAALALEGEAVDPAAFAHALAMGRRRDA
AAGRTLVGPHRADLSVTHVAKGQAAALCSTGEQKALLLGIVLAHADLVTEQRGLPPVLLL
DEVAAHLDPSRRAALFERLAGRGQVWMTGTEPGLFTDVPGEATRVEF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccgcctggtcctcaccgatttccgcaatcatgccgaccttgcgctgtcaccg
gcggcggggttcgtcgtgctgaccggcgaaaacggcgcggggaaaaccaacgtgctggag
gcggtgtcgctgctcgcgcccggccgggggctgcgccgcgccgcgttgtcggcgatggcg
cggcaggggggcaagggcggattcggcgtcgcggcgacgctcgatggcgatgtcgagatc
gcaaccggcgcgctggcctccgcgcccgaaaggcgggtcgtcagggtgcagggggcggcc
acaagcgccaatgcgctggccgactggctgtccgtcctgtggctgacccctacgatggac
cggctgttcgtcgagcccgcgtccgagcggcggcggttcctcgaccggctggtgctggcg
ctggccccggcgcacgggatgcacgcgacgcgctatgacgccgcgatgcgtgagcgcaac
cggctgctggcaagcgacggtccggtcgatcccgactggctgagcgcgctggaggcacgg
atggtcgagcatggcgcggcgctcgatgccgcgcgggtggcggcggtggcggcgctcgac
caaagactggaggaggcgcccgacagcgtgttcgctcgggccgcgttggcgctggagggg
gaggcggtcgacccggcggcattcgcccatgcgctggccatggggcgccggcgcgatgcg
gcggcggggcggacgctggtcgggcctcaccgggccgacctttccgtgacgcatgtggcc
aaggggcaggcggcggcgctgtgctccacgggcgagcagaaggcgctgctgctgggcatc
gtcttggcccatgccgatctggtgaccgagcaacgcgggctgcccccggtgttgctgctg
gacgaggtggcagcgcatctcgatccctcgcgccgtgccgcgctgttcgagcggctggcc
gggcgggggcaggtgtggatgaccgggaccgagcccgggctgttcaccgatgtgcccggg
gaggcgacgcgggtggagttttga
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