Sphingomonas sp. LK11: AV944_01315
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Entry
AV944_01315 CDS
T04954
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00730
Thiamine metabolism
splk01100
Metabolic pathways
splk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AV944_01315
Enzymes [BR:
splk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AV944_01315
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APX64709
LinkDB
All DBs
Position
complement(269236..271083)
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AA seq
615 aa
AA seq
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MADIPAKAEIGVTTGPIRGSKKIHVGPLNVAMREIHLDPSSGEPPLRVYDTSGAYTDPNA
RIDIMAGLPQIRRNWIEARGDVEAYDGREIRPEDNGQLGPDRSGGVPQFPRTGLNRPLRA
RAGMNVSQMHYARRGIITPEMEYVATRENLGREMLKEYVRDGESFGADIPDYVTPEFVRD
EVARGRAIIPNNINHPESEPMAIGRNFLIKINANIGNSAVASNVASEVDKLVWSIRWGAD
TVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEIFRDTLIEQAEQ
GVDYFTIHAGVRLPYIPLTAKRVTGIVSRGGSIMAKWCLAHHKESFLYERFDEITEIMKA
YDIAYSLGDGLRPGAIADANDEAQFAELYTLGELTKRAWAQDVQVMIEGPGHVPMHKIKQ
NMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLP
DRDDVKVGVVTYKLAAHAADLAKGHPAAKMRDDALSRARFEFRWRDQFNLSLDPDTAESY
HDQTLPAEGAKTAHFCSMCGPKFCSMKITQEVREFAAKQNAPVDTFVAAEDAEAGMQEMS
EKFREKGGEVYLPAE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatccccgcaaaggccgaaattggcgtgaccaccggccccattcgtggctcg
aagaagattcacgtcggcccgctgaacgtcgcgatgcgcgaaatccatctcgacccctct
tcgggcgagccgcccttgcgcgtgtacgatacgagcggagcgtataccgatccgaatgcg
cgcatcgacatcatggcgggcctgccgcagatccgtcgcaactggatcgaggcgcgcggc
gatgtcgaggcctatgacggccgcgaaatccgtcccgaggataacggccagcttggcccc
gaccgttcgggcggcgtgccgcaattcccgcgcaccggcctgaaccgtccgctgcgcgcg
cgtgcaggcatgaacgtcagccagatgcattatgcccgccggggcatcatcacgcccgaa
atggaatatgtcgcgacccgcgagaatctgggccgcgagatgctgaaggaatatgtccgc
gacggcgagagcttcggcgcggacatccccgattacgtgacgcccgaattcgtccgcgac
gaagtggcgcgcggccgagcgatcatccccaacaacatcaaccaccccgaatccgagccg
atggcgatcggccgcaacttcctgatcaagatcaacgccaatatcggcaattcggcggtc
gcctccaacgtggcgtccgaggtcgacaagctggtctggtcgatccgctggggcgcggac
acggtcatggacctgtcgacgggccgcaacatccacgacacgcgcgaatggatcatccgc
aactcgccggtgccgatcggcacggtccccatctatcaggcgctggaaaaggtcggcggc
atcgccgaggagctgacctgggagatcttccgcgacacgctgatcgaacaggccgagcag
ggcgtcgactatttcaccatccatgcgggcgtgcgcctgccctacatcccgctgaccgcc
aagcgcgtcaccggtatcgtatcgcgcggcggctcgatcatggcgaagtggtgcctggcg
catcacaaggagtcgttcctctacgaacgcttcgacgagatcaccgagatcatgaaggcg
tacgacatcgcctattcgctgggcgacggcctgcgtcccggtgccatcgccgacgccaat
gacgaggcgcagtttgccgagctctatacgctgggcgagctgaccaagcgcgcctgggcg
caggacgtgcaggtcatgatcgaaggccccggccatgtgccgatgcacaagatcaagcag
aacatggacaagcagctggaggcgtgcggcgaggcgcccttctacacgctcgggccgctc
accaccgacatcgcgccggggtatgaccatatcaccagcggcatcggtgcggcgatgatc
ggttggtacggcacggcgatgctctgctacgtcacgcccaaggagcatctgggcctgccc
gaccgcgacgatgtgaaggtcggcgtggtgacctacaagctcgccgcccacgccgccgac
ctcgccaaggggcaccccgccgccaagatgcgcgacgacgcgctaagccgcgcccgcttc
gagttccgctggcgcgaccagttcaacctgtcgctcgaccccgacacggcggaatcctac
cacgaccagaccctcccggccgagggcgccaagaccgcgcatttctgttcgatgtgtggc
ccgaaattctgctcgatgaagatcacgcaggaagtgcgggaattcgcggccaagcagaac
gcgccggtcgacaccttcgtcgcggcggaggatgccgaggcgggcatgcaggaaatgagc
gagaaattccgcgagaagggcggggaggtttaccttccggcggagtga
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