Sphingomonas sp. LK11: AV944_01560
Help
Entry
AV944_01560 CDS
T04954
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
splk03009
]
AV944_01560
Enzymes [BR:
splk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
AV944_01560
Ribosome biogenesis [BR:
splk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AV944_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
APX64749
LinkDB
All DBs
Position
complement(325323..325904)
Genome browser
AA seq
193 aa
AA seq
DB search
MPRLLLFNKPYGVLSQFTDKGSPTVRSTLSDFIAVKGVYPAGRLDRDSEGLLLLCDDGRL
QARIADPRFKMPKTYLVQVEGDPQESDLARLRQGVRLKDGMTLPADVARIDAPDLWLRDP
PIRQRKLIPDNWLKITIREGRNRQVRRMTAAVGLPTLRLVRWSIGDWSVAGIVPGQFVEA
PALGRTDGGAHDR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccccggctgctcctgttcaacaaaccctatggggtcctatcgcaattcacggacaag
ggatcgcccacggttcggtcgaccttgtcggacttcatcgcggtgaagggggtctatccc
gccgggaggctcgatcgggatagcgagggcctgttgctgttgtgcgatgacgggcggttg
caggcgcgcattgccgatccgcgcttcaagatgcccaagacctatctcgtccaggtcgaa
ggcgatccgcaggaatctgacctggcgcgcttgcggcagggcgtccgcctcaaggacggc
atgaccctgcccgccgatgtggcgcgtatcgacgcgccggacctgtggctgcgcgatccg
ccgatccgccagcgcaagctgatccccgacaactggctgaagatcacgatccgcgaaggg
cgcaaccggcaggtgcgccgcatgacggcggcggtcgggttgcccacgctgaggctggtt
cgctggtcgatcggcgactggtcggtcgccgggatcgtgccgggtcagttcgtggaggct
cctgctctgggcaggacggacggcggcgcgcacgaccggtaa
DBGET
integrated database retrieval system
