Sphingomonas sp. LK11: AV944_01735
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Entry
AV944_01735 CDS
T04954
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AV944_01735
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
splk01007
]
AV944_01735
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splk03016
]
AV944_01735
Enzymes [BR:
splk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AV944_01735
Amino acid related enzymes [BR:
splk01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AV944_01735
Transfer RNA biogenesis [BR:
splk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AV944_01735
Prokaryotic type
AV944_01735
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
APX64781
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All DBs
Position
complement(357252..359615)
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AA seq
787 aa
AA seq
DB search
MKFTLGWLKSHLDTDADLDTIVEGLTRIGLEVEGVHNPGEALSSFRVARILSAERHPQAD
KLQVLSVDAGDGPMQVVCGAPNARAGLVGVFGAPGGYVPGLDVTLKVAAIRGVESNGMMC
SARELQIGEGHDGIIELPEDAAIGTSFPDYAGLNDPVIDVSITPNRQDCMGVHGIARDLA
AAGLGTLIAPTVPSVAGEGAGPDVRIEDAEGCPAFYAQGVSGLTNGEAPEWMRQRLTAIG
QKPISALVDITNYMTVDLGRPLHVYDKAKLSGGLVARHAKDGETVEALNGKTYTLSEGMT
VIADDAGVHDIGGIMGGAHSGVSETTTDVIIECAYFTPEAIARTGQKLALTSDARTRFER
GVDPAFLDDGLAIATFLVLEYCGGTASGVTRAGQPPVLAKTIAYDPNLAETLGGLAIAAD
RQKAILESLGFTVTADWQVTAPSWRRDVDGPADLVEEVIRIEGIDHVPPVALPRAPGVAR
PTATPQQKLERRARRAAAARGLDEAVTWSFISEAQAAPFGGGAFTLANPISEDLKVMRPS
LLPGLLAATERNIKRGATAVRLFEIGRRYLEEAERPTLGVVLAGDKSARNWRSGKAQAFD
AYDAKAEAIALLAQAGAPVDNLQVMGEAGDAWHPGQSGTLRLGPKTVLAAFGMVHPSVLK
AFDLDGAVAAVELYLDAIPPKRATGFMRPAYTPPALQSVKRDFAFLVPDTLAADMLIRAV
RGADKAAITAARVFDVFAGQGVPDGHKSVAVEVLLQPSQKSFTDEELKAIADKIVAAAAK
QGAQLRG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccctgggctggctgaagagccatctggacaccgatgccgacctcgacacc
atcgtcgaggggctgacccgtatcggcctggaggtcgagggcgtgcacaatccgggcgag
gcgctgtcctcgttccgcgtcgcgcgcatcctgtcggccgagcggcatccgcaggcggac
aagttgcaggtcctgtcggtcgatgccggtgacggcccgatgcaggtcgtgtgcggtgcg
cccaacgcccgcgcagggctggtcggcgtgttcggcgcgccggggggctatgtccccggc
ctcgacgtgacgctgaaggtcgccgccattcgcggcgtcgagtcgaacggcatgatgtgc
tcggcgcgcgagttgcagattggcgagggccatgacggcatcatcgaactgcccgaggat
gcagcgatcggcacgtccttcccggactatgcggggctcaacgatccggtcatcgacgtg
tcgatcacgccgaatcgccaggactgcatgggcgtgcacggcatcgcgcgcgatctcgcc
gccgcagggctgggcacgctgatcgccccgaccgtgccgtcggtcgcgggtgagggcgcc
ggtcccgatgtccgcatcgaggatgccgagggctgcccggccttctatgcgcagggcgtg
tcgggcctgaccaatggcgaggcccccgaatggatgcgccagcgactgaccgcgatcggg
cagaagccgatctccgcgctggtcgacatcaccaattatatgacggtcgatctcggccgc
ccgctgcacgtctatgacaaggccaagctgtcgggcggtctggtcgcgcgtcatgccaag
gacggcgagacggtcgaggcgctcaacggcaagacctataccctgtcggagggcatgacc
gtcatcgccgacgatgcgggcgtgcacgatatcggcggcatcatgggcggcgcgcattcg
ggcgtgtcggagacgaccaccgacgtcatcatcgaatgcgcgtacttcacccccgaggcg
atcgcgcgcaccggccagaagctcgcgctgaccagcgacgcgcgcacccggttcgagcgc
ggggtggacccggccttcctcgacgacggcctcgccatcgcgaccttcctcgttctggaa
tattgcggcggaaccgccagcggcgtgacccgcgcgggccagccgccggtcctggcgaag
accatcgcctatgaccccaatctggccgagacgctgggcggccttgccatcgcggccgac
cggcaaaaggcgatcctcgagtcgctgggcttcaccgtcaccgccgactggcaggtcacg
gcccccagctggcgccgcgacgtggacggccccgccgatctggtcgaggaagtcatccgc
atcgagggcatcgaccatgttcccccggtggcgctgccccgcgccccgggcgtcgcgcgt
cccaccgccacgccgcagcagaagctggaacgtcgcgcccgccgcgccgccgccgcgcgc
ggcctggacgaggcggtgacgtggagcttcatcagcgaggcgcaggcggcgcccttcggc
ggcggcgcgttcacgctcgccaacccgatcagcgaggatttgaaggtcatgcggccctcg
ctgctccccggcctgctcgccgcaaccgagcgcaacatcaagcgcggcgcgactgccgtg
cggctgttcgagatcggccgccgctatctggaggaggccgagcggccgacgctgggcgtg
gtgctggcgggtgacaagtcggcccgcaactggcggtcgggcaaggcgcaagcgttcgac
gcctatgacgccaaggccgaggcaatcgcgctgctcgcccaggcgggcgcaccggtcgac
aatcttcaagtgatgggcgaggcgggtgacgcctggcatcccggccagtcgggcacgctg
cggctggggccgaagacggtgctggcggcgttcggcatggtccatccgtccgtgctgaag
gcgttcgatctcgacggcgcggtggcggcggtggagctgtatctcgacgcgatcccgccc
aagcgggcgacgggcttcatgcgcccggcctacacgcccccggccttgcagtccgtcaag
cgcgacttcgccttcctggtgcccgacacgctggccgccgacatgctgatccgggcggtg
cggggtgcggacaaggccgccatcactgccgcacgcgtgttcgacgtgttcgcagggcaa
ggcgtgcccgatggtcacaagtcggtcgcggtcgaggtgcttctgcaaccctcgcagaag
agcttcaccgatgaggaactgaaggccatcgccgacaagatcgtcgcggcggccgccaag
cagggagcacaactccgtggctaa
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