Sphingomonas sp. LK11: AV944_02625
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Entry
AV944_02625 CDS
T04954
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AV944_02625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splk03019
]
AV944_02625
03009 Ribosome biogenesis [BR:
splk03009
]
AV944_02625
04131 Membrane trafficking [BR:
splk04131
]
AV944_02625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
splk04147
]
AV944_02625
Messenger RNA biogenesis [BR:
splk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AV944_02625
Ribosome biogenesis [BR:
splk03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AV944_02625
Membrane trafficking [BR:
splk04131
]
SNARE
SNARE associated proteins
Others
AV944_02625
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AV944_02625
Exosome [BR:
splk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AV944_02625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_33
CDC48_2
AAA_5
AAA_2
AAA_14
TIP49
IstB_IS21
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
Zeta_toxin
AAA_18
AAA_7
Mg_chelatase
DUF815
ABC_tran
TsaE
nSTAND_NTPase5
AAA_3
AAA_11
Sigma54_activat
AAA_17
AAA_19
AAA_30
AAA_24
NB-ARC
Parvo_NS1
ATPase
AAA_25
bpMoxR
PhoH
SLFN-g3_helicase
Viral_helicase1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
APX64915
LinkDB
All DBs
Position
537541..539832
Genome browser
AA seq
763 aa
AA seq
DB search
MADSDAPTRKIQVANSRPEDSGRGLAHVPRSLMAALGITEGDVVEIVGKQATPARAVAPY
PEDEGLDLVRIDGLQRANAGVGSGDFVEVRKVESKPATRVVFAPAQQNLRLQGSAQALKR
TFFNRPLCQGDVVATAGQQRVTNMPPGVAQFMNAPAYALQEIRLAVVAASPKGVVHIDEN
TEVELRPEYEEPREARRADVTYDDIGGMASTIDQLREMVELPLRYPELFERLGVEPPKGV
LLHGPPGTGKTRLARAVANESDAQFFLINGPEIMGSAYGESEQRLREIFEEATKSAPSIV
FIDEIDSIAPKRDRVQGEAEKRLVAQLLTLMDGLEARANLVIIAATNRPEAIDEALRRPG
RFDREIVVGVPDERGRREILGIHTRGMPLGDKVDLNELARTTFGFVGADLAALTREAAIE
AVRRIMPRLNLEERTIPAEVLDTLSVTREDFLEALKRVQPSAMREVMVQAPTVRWEDVGG
LDTAQMKLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANFIA
TKSSDLLSKWYGESEQQITRLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERVVN
TILAEMDGLEELQSVVVIGATNRPNLVDPALLRPGRFDELIYVGVPDKAGRRRILGIQTA
KMPLAEDVDLDDVAARTDRFTGADLGDVVRRAGLIALRKSLGATQVDMAAFDEALTEARA
SVTPEMERDYEQIAAKLKQEAAAIQPIGFIAPGMLTPRGDKQP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgacgcgccgacccgcaagatacaggtggccaatagccgccccgaggat
tcgggccggggcctcgcccatgtcccgcgcagcctgatggcggcgctgggcatcaccgag
ggcgacgtggtcgagatcgtcggcaaacaggccaccccggcgcgcgcggtcgccccctat
cccgaggatgaagggctggacctcgtccgcatcgacggattgcagcgcgccaatgcaggc
gtcggctcgggcgatttcgtcgaggtgcgcaaggtcgaatcgaagcctgcgacccgtgtc
gtctttgcccccgcgcaacagaatctgcggcttcagggctcggcccaggcattgaagcgg
accttcttcaaccggccgctctgtcagggcgatgtggtggccacggcggggcagcagcgg
gtcaccaacatgccgccgggcgtcgcgcagttcatgaacgcgcccgcctatgcgctccag
gaaatccgcctcgcggtcgtcgcggccagccccaagggggtcgtccatatcgacgagaat
accgaggtcgagctgcgtcccgaatatgaggaaccgcgcgaggcgaggcgcgccgacgtc
acctatgacgatatcggcggcatggcctcgaccatcgaccagctgcgcgagatggtcgag
ctgccgctacgctatcccgaattgttcgagcggttgggcgtcgagccgcccaagggcgtg
ctgctccacgggccacccggcaccggcaagacgcggctggcccgtgccgtcgccaatgag
tcggatgcccagttcttcctgatcaacggccccgagatcatgggctcggcctatggcgag
tcggagcagcggctgcgcgagattttcgaggaggcgaccaaatccgccccctcgatcgtc
ttcatcgacgaaatcgactcgatcgcccccaagcgcgaccgcgtgcagggtgaggcggag
aagcggctcgtcgcacagctgctgacgctgatggatgggctggaagcgcgcgcgaacctg
gtcatcatcgccgcgaccaatcggcccgaagcgatcgacgaggcgctgcggcggccgggt
cggttcgaccgcgagatcgtggtcggcgtgcccgatgagcgcgggcggcgcgaaatcctg
ggcatccatacgcgcggcatgccactgggcgacaaggtcgatctgaacgagctggcgcgc
accaccttcggctttgtcggcgcggatttggccgcgctgacccgcgaggcggcgatcgag
gcggtgcggcggatcatgccgcgcctgaacctggaggagcggacgatcccggccgaagtg
ctcgacacgctatcggtgacgcgcgaggatttcctggaggcgctgaagcgcgtccagccc
tcggcgatgcgcgaggtgatggtgcaggcgccgaccgtgcgctgggaggatgtcggcggc
ctcgacaccgcgcagatgaagctgaaggaaggcgtcgaactgccgctgaaggacccggat
gcgtttcggcgcctgggcattcggcccgccaagggtttcctgctctatggcccgccaggc
accggcaagacgctgttggcgaaagcggtcgcgcgcgaggcgcaggccaatttcatcgcc
accaagtcgagcgaccttctgtccaaatggtatggcgagagcgagcagcagatcactcgg
ctgttcgcccgtgcgcggcaggtggcgccgaccgtgatcttcatcgacgaactggattcg
ctggtcccggcgcgtggcggcgggctgggtgagccgcaggtgaccgagcgggtggtcaac
accattctggccgagatggacgggctggaggagttgcagtcggtcgtcgtcatcggcgcg
accaatcggcccaatctggtcgaccccgcgctgctccggcccggtcggttcgacgaactg
atctatgtcggcgtgcccgacaaggcggggcggcggcgtatcctgggcatccagaccgcc
aagatgccgttggccgaggatgtcgatctggacgatgtggcggcgcggaccgaccgtttc
accggtgccgatctgggcgatgtggtgcgccgggcgggcctgatcgcgctgcgcaagtcg
ctgggcgcgactcaggtcgatatggcggcctttgacgaggcactgaccgaggcgcgggcg
agcgtaaccccggaaatggagcgcgattacgaacagatcgccgccaagctgaagcaggag
gcggctgcgatccagccgatcggcttcatcgcgccgggcatgctgacgccgcgaggggac
aagcagccgtaa
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