Sphingomonas sp. LK11: AV944_03340
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Entry
AV944_03340 CDS
T04954
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splk03021
]
AV944_03340
03009 Ribosome biogenesis [BR:
splk03009
]
AV944_03340
Transcription machinery [BR:
splk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AV944_03340
Ribosome biogenesis [BR:
splk03009
]
Prokaryotic type
rRNA transcription factors
AV944_03340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
APX65032
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Position
697438..699060
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AA seq
540 aa
AA seq
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MATAISANKAELIAIANAVASEKMIDKGIVIEAMEDAIQRAARARYGAENDIRAKLDPNS
GDLRLWRVVEVVEQVDDYYKQIDLKGAEKLQKGAAIGDFIVDPLPPIEFGRIAAQAAKQV
IFQKVRDAERDRQYDEFKDRQGEIITGVVKRVEFGHIVVDLGRAEGVIRRDQQIPREVVR
VNDRIRSLILNVRRENRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISHDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSPDTATFVVNALQPANVS
RVVIDEEEDRIEVVVPDDQLSLAIGRRGQNVRLASQLTAKAIDILTEADASEKRQKEFVA
NSELFQNELDVDETLAQLLVAEGFGALEEVAYVELDELAAIEGFDEDLAQELQSRAQEAL
DRREQAARDERRGLGVDDALAEMPYLTEAMLVTLGKAGIKTLDDLADLATDELVEKKRAE
PRRRGDDTPRPAPKGGILAEYGLSDEQGNEIIMAARAHWFTDEEEPAADAGEEQAEGDEA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgccatttccgccaacaaggcggaactgatcgcgatcgcgaatgcggtcgcc
tcggaaaagatgatcgacaagggtatcgtgatcgaggcgatggaggacgcgatccagcgc
gccgcccgtgcccgctacggtgccgagaacgacatccgtgcgaagctcgatcccaattcg
ggcgacctgcgtctgtggcgcgtcgtcgaggtggtcgagcaggtcgacgactattacaag
cagatcgacctgaagggtgccgagaagctgcaaaagggtgccgcgatcggcgacttcatc
gtcgacccgctgcccccgatcgaattcggccgcattgcggcgcaggcggccaagcaggtc
atcttccagaaggtccgcgacgccgagcgtgaccgtcagtatgacgagttcaaggatcgc
cagggcgagatcatcaccggcgtcgtcaagcgcgtcgagttcggtcatatcgtcgtcgat
ctgggccgtgccgagggcgtgatccgtcgcgaccagcagattccgcgcgaagtcgtccgc
gtgaacgaccgcatccgctcgctgatcctgaacgtccgccgcgagaaccgtggcccgcag
atcttcctgagccgcgcgcacccggacttcatgaagaagctgttcgcgcaggaagtgccc
gaaatctatgacggcatcatcgagatcaaggccgccgcgcgcgatccgggcagccgcgcc
aagatcggcgtgatcagccacgactcgtcgatcgacccggtcggtgcctgcgtcggcatg
aagggcagccgcgtccaggcggtcgtgcaggaaatgcagggcgaaaagatcgacatcatc
ccctggtcgcccgataccgcgaccttcgtggtgaacgcgcttcagcccgcgaacgtcagc
cgcgtcgtgatcgatgaggaagaggaccgtatcgaggtcgtcgtccccgacgatcagctc
agcctcgccatcggccgtcgcggccagaatgtccgtctggccagccagctgaccgccaag
gcgatcgacatcctgaccgaggccgatgcctccgagaagcgtcagaaggaattcgtcgcg
aattccgagctgttccagaacgaactggacgtggacgagacgctggcccagctgctggtc
gccgaaggcttcggcgcgctggaagaggtcgcctatgtcgagctcgacgaactggccgcg
atcgagggcttcgacgaggatctggcgcaggagctgcaaagccgtgcgcaggaagcgctg
gaccgccgcgaacaggctgcgcgcgacgagcgtcgtggcctgggcgtcgacgacgcgctg
gccgagatgccgtatctgaccgaggcgatgctggtcacgctgggcaaggcgggcatcaag
acgcttgacgatctcgccgatctggcgaccgacgagctggtcgagaagaagcgcgccgag
ccgcgtcgtcgtggtgatgacaccccgcgtcccgcccccaagggcggcatcctggccgaa
tatggcctgagcgatgagcagggcaacgagatcatcatggccgcgcgtgcgcactggttc
accgatgaggaagagcctgccgcagacgccggtgaagagcaggcggagggcgacgaagcc
tga
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