Sphingomonas sp. LK11: AV944_03545
Help
Entry
AV944_03545 CDS
T04954
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
splk
Sphingomonas sp. LK11
Pathway
splk02020
Two-component system
splk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV944_03545
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AV944_03545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
splk02022
]
AV944_03545
02035 Bacterial motility proteins [BR:
splk02035
]
AV944_03545
Two-component system [BR:
splk02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AV944_03545
Bacterial motility proteins [BR:
splk02035
]
Flagellar system
Flagellar assembly proteins
Others
AV944_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_28
AAA
AAA_2
Sigma70_r4_2
AAA_3
AAA_16
HTH_23
HTH_29
AAA_7
AAA_19
Xre-like-HTH
AAA_22
MerR
MCM
T2SSE
HTH_24
TIP49
HTH_10
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
APX65069
LinkDB
All DBs
Position
complement(746904..748187)
Genome browser
AA seq
427 aa
AA seq
DB search
MSSIHPSAALVKQKYALISGLRAQGMAIAEQGAAAQAGDLFLVTDGDVVEHPARTIVVSD
GPVPAIIPAMGGQPASVTYSAAESGVGNSFVRALLAGSAMPTAADPESLALFTLAERVAQ
ADITVLINGPTGTGKEVVARAIHAQSARANKPFVAINCAALPESMLEALLFGHQKGAFTG
AAQAGEGFFRAADGGTLLLDEIAEMPLQLQAKLLRVLQEREVIPLGASMPQSVDVRVIAC
ANRDLQAEVAAGRFRADLYYRLSVFPLTTKALAERRMDIPALAATMILRHAAGRTAIPWP
SAAAIDKLAMHNWPGNVRELENVIQRALLFAGGATIEPEHIVFDRPMVANDLDDEPLTVT
TAEATLGKVVQMSEFAAIREMLAACGGNRVETAKRLGISERTLRYRLAKAREQGEEIIRP
SSRAVMA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgattcacccctccgctgcgctcgttaagcagaaatacgccctgatttccggg
ctgcgggcccagggcatggccattgccgagcagggcgcggccgcccaggccggggacctg
ttcctcgtcaccgacggcgacgtggtcgagcatccggcgcgcaccatcgtcgtgtccgac
ggtccggtccccgccatcatcccggcaatgggcggccaaccggccagcgtgacctattcc
gccgccgagtcgggcgtcggcaacagcttcgtccgcgcgctgctggcgggttcggccatg
ccgaccgccgccgatccggagagcctggcactgttcaccctggccgagcgggtcgcgcag
gcggacatcaccgtcctgatcaacggcccgaccggcaccggcaaggaagtcgtggcccgc
gctatccatgcgcagtcggcccgcgccaacaagcccttcgtcgcaatcaactgcgccgcg
ctccctgagtcgatgctcgaggcgctgctcttcggccaccagaagggtgcgttcaccggc
gcggcgcaggcgggcgaaggtttcttccgcgcggcggacggcggcacgctgctgctcgac
gagattgccgagatgccgctccagctccaggccaagctgctccgcgttctgcaggagcgc
gaggtgatcccgctcggcgcgtcgatgccgcagtcggtcgacgtccgcgtcatcgcctgc
gccaaccgcgacctgcaggccgaagtggccgccggccggttccgtgccgacttatactac
cgtctgtctgtcttcccgctgaccaccaaggcgctggccgagcgtcgcatggacatcccc
gcgctcgccgcgacgatgatcctgcgtcacgctgcgggccgcaccgccattccgtggccg
agcgcggcggcgatcgacaagctggccatgcacaattggcccggcaatgtccgcgagctg
gaaaacgtcatccagcgtgcgctgctgttcgccggcggcgcgacgatcgagcccgagcat
atcgtgttcgaccgtccgatggtcgccaacgacctggacgacgagccgctgaccgtgacg
accgcggaagcgacgctcggcaaggtcgtacagatgagcgagttcgccgcgatccgcgaa
atgctggccgcatgcggcggcaaccgggtcgagaccgccaagcgcctgggcatttctgag
cgcaccctgcgctaccgtctcgccaaggcacgcgaacagggcgaggagatcatccgaccc
tctagccgggccgtgatggcatga
DBGET
integrated database retrieval system
