Sphingomonas sp. LK11: AV944_04805
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Entry
AV944_04805 CDS
T04954
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AV944_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_04805
Enzymes [BR:
splk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AV944_04805
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AV944_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6182
DUF7260
Motif
Other DBs
NCBI-ProteinID:
APX65275
LinkDB
All DBs
Position
complement(1009926..1010165)
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AA seq
79 aa
AA seq
DB search
MDTPIEELTFEDALKELERIVGRLESGEATLDESIRLYERGDRLRQRCAERLDAAQARIE
AIRLDAEGKAAGTRPFQAG
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcccatcgaagaactgacgttcgaggacgccctcaaggaattggagaggatc
gtcggccgactggaaagcggcgaagcgacgctcgacgaatcgatccgcctctatgagcgc
ggcgatcgtctgcgccaacgctgcgccgaacggctcgacgccgcccaggcccggatcgag
gcgatccgcctcgacgccgagggcaaggccgcgggcacccgcccgtttcaggcgggttga
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