Sphingomonas sp. LK11: AV944_05470
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Entry
AV944_05470 CDS
T04954
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AV944_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splk03019
]
AV944_05470
Enzymes [BR:
splk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AV944_05470
Messenger RNA biogenesis [BR:
splk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AV944_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APX65384
LinkDB
All DBs
Position
complement(1131118..1132278)
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AA seq
386 aa
AA seq
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MGGMTPGTAPWADRPALIALAARLEARFVGGAVRDMLLGLAVADIDLATPLSPETVIDRV
RDSGFKPVPTGIAHGTITAVLPEGPVEVTTLRRDVSTDGRHAVVAFTDDWREDAARRDFT
MNALYADPATGELFDYFGGLDDLKAGRVRFIGDPLQRIAEDHLRILRFFRFHARFGQAVD
EAGLAACAARANDLMALSRERIAAELLKLLVAARAVPVVALMVKHGIFRAVIPEIDAEGV
KRLTRLAEREVAAEIAPDAIRRLAALLPPQAAENVGARLKLSNSDRKRLIAATAGSGDEG
PQALAYRAGLVSAIDRLLLAGESIEPIRDWTPPALPLSGGALVERGIGKGPEVARLLRRI
ETQWIAEGFPDAERVGRIADEAVAQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcatgacgcccggcaccgcaccctgggccgaccgacccgcattgatcgcgctg
gccgcgcggctggaggcgcggttcgtcggcggggcggtgcgcgacatgctgctgggcctg
gccgttgccgatatcgatctggcgacgccgctctcgcccgaaaccgtcatcgaccgggtg
cgcgacagcgggttcaagccggtgccgaccggcatcgcgcatggcacgatcaccgccgtc
ctgcccgagggcccggtcgaggtcacgacgctgcgccgcgacgtgtcgaccgatggccgc
catgccgtggtcgccttcaccgatgactggcgcgaggatgcggcgcggcgcgacttcacg
atgaacgcgctctatgccgatcccgcgaccggcgaattgttcgactatttcggcggtctg
gacgacctgaaggccgggcgggtgcgcttcatcggcgacccgttgcagcggatcgccgag
gatcatttgcgcatcctgcgcttcttccgcttccatgcgcgcttcggccaggcggtcgac
gaggccggactggccgcctgtgccgcgcgcgccaacgaccttatggcattgtcgcgcgaa
cggatcgcggcggagttgctgaaattgctggtcgccgcccgcgccgtgccggtggtcgcg
ctgatggtcaagcatggcatcttccgcgcggtcatccccgagatcgatgcagagggcgtg
aaacggctgacccggctggccgagcgcgaagtagcagcggaaatcgcgcccgacgcgatc
cggcgactcgccgccctcctacctccacaagccgccgagaatgtcggggcgcggctgaaa
ctgtccaatagcgaccgcaagcggctgatcgccgcgaccgccggatcgggcgacgaggga
ccgcaggcgctggcctatcgcgcggggctggtgagcgcgatcgaccggctgttgctggcg
ggcgaatcgatcgagccgattcgcgactggacgccccctgccctgccactgtccgggggt
gcactggtcgaacgcgggatcggcaaggggccggaggtggcgcggctgctccgccggatc
gaaactcagtggatcgccgaaggctttccggatgccgaacgagtcggccgcatcgccgac
gaggcggtggctcaggcctga
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