Sphingomonas sp. LK11: AV944_05555
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Entry
AV944_05555 CDS
T04954
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV944_05555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splk03032
]
AV944_05555
Enzymes [BR:
splk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AV944_05555
DNA replication proteins [BR:
splk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AV944_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA_16
ATPase
AAA
NACHT
nSTAND3
AAA_22
RuvB_N
IstB_IS21
NB-ARC
divDNAB
Motif
Other DBs
NCBI-ProteinID:
APX65398
LinkDB
All DBs
Position
1143240..1144733
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AA seq
497 aa
AA seq
DB search
MATLAFQNPAAATESQQLPHNTEAEAALLGAMMIDNRLADDLVDRLDPDHFFDPVHGRVF
SAIKNLRATDMLATPVTLRPMFEADEGMKAMGGPSYLAQLTGSGAGLIGARQFATQIYDL
AMLRALVTVGRTLVDRAMDTSEEVNPRAQIELAENELFKVAADGGSENAVKSFSQATTMA
VKNAERALNSGGHVSGITTGLDSVNAKIGGMHRSDLMILAGRPGMGKTSLATNIAFNAAR
RWMRDMQDGIPPSESVGAKVAFFSLEMSADQLATRILAEQSGISSEALRMGKISRNEFAQ
LAAAAAELEQLPLFIDDTGGLTISALHTRVRRLQRRLNNELGLVVVDYLQLLTGSGKSSE
GNRVQEISEISRGLKTLAKDMNVPVLALSQLSRAVEQREDKRPMLSDLRESGSIEQDADM
VWFVFREDYYMMQREPKRPMEGDDGKVFEDHAKWATEVERVYGLAELIVAKQRHGATGKV
VMKFDPTITRFTDFAGY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcgcatttcagaaccccgctgccgccaccgagtcgcagcagcttccccat
aataccgaggcggaggccgcgctgctgggcgcgatgatgatcgacaaccggctggccgac
gatctggtcgaccggctggacccggaccatttcttcgacccggtccatggccgtgtcttc
tccgcgatcaagaacctgcgcgccaccgacatgctggcgacgccggtcaccctgcgcccc
atgttcgaggcggatgaggggatgaaggcaatgggtggcccgtcctatctggcgcagttg
accgggtcgggcgcgggcctgatcggagcgcggcagttcgcgacgcagatctatgacctg
gcgatgctccgcgcgctggtgacggtgggccgcacgttggtcgaccgggcgatggacacc
tccgaagaggtgaacccgcgcgcccagatcgagctggccgagaacgagctgttcaaggtc
gctgcggacggcggctccgagaatgcggtcaagagcttctcccaggccaccaccatggcg
gtcaagaatgccgagcgcgcgctcaattcgggcggccatgtctcgggcatcaccacgggt
ctcgactcggtcaatgccaagatcggcggtatgcaccgttccgacttgatgatcctggcg
ggccgtccgggcatgggcaagacctcgctggcgaccaacatcgcattcaatgcggcgcgc
cgctggatgcgcgacatgcaggacggcattccgccctccgagtcggtcggcgccaaggtc
gcgttcttcagcctcgaaatgtcggccgaccagctggcgacgcgtatcctggccgagcag
tcggggatcagctccgaagcactccgcatgggcaagatcagccgcaatgagttcgcccag
ctcgccgccgccgccgccgaactggagcagttgccgctgttcatcgatgataccggcggc
ctgaccatctccgcgctgcacacccgcgtccggcggttgcagcggcggttgaacaacgag
ctgggtctggtggtggtcgactatctccagctgctgaccggctcgggcaagtcgtccgag
ggcaatcgcgtgcaggaaatctccgagatttcgcgcgggctgaaaacgctggccaaggac
atgaacgtgccggtgctggcgctgtcgcagctgagccgtgcggtcgagcagcgcgaggac
aagcggccgatgctgtccgacctccgcgaatcgggctcgatcgagcaggacgccgacatg
gtctggttcgtgttccgcgaagactattacatgatgcaacgcgagcccaagcgtccgatg
gaaggcgatgacggcaaggtcttcgaggaccacgcgaagtgggcgaccgaggtggagcgg
gtgtacggcctggccgagctgatcgtcgccaagcagcgtcacggtgcgaccggcaaggtc
gtgatgaagttcgatccgacgatcacgcggttcacggatttcgcgggatattga
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