Sphingomonas sp. LK11: AV944_05660
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Entry
AV944_05660 CDS
T04954
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_05660
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
APX65415
LinkDB
All DBs
Position
1164097..1168329
Genome browser
AA seq
1410 aa
AA seq
DB search
MADEQTMAAEPVNETVIVRRPVWQRVLKWIGIAILGLILLVGAILLGINTDPGRRFVADQ
LGGYTTASGLNIKVGRIEGSLYGRMNLVDLRVSDPKGVFLSSPRLAVDWRPFAYTKNHVD
VRSLTADLVTLARRPELKPTPSDPNAPLLPDLDIDVNRLAIKRFVIGAPVTGQRHILAID
GKVHIADRRAQVTASADALRGPGIAGGDRLRLVLDAVPDADRLAVDVKLTAPTGGVVASM
AGLKAPMTVTVDGRGGWKAWQGRAIATLGGGELANLNATARDGHIEVRGVTRPGLYLERP
VERLTAPALQVAIDTTLNERRADTRMKLRSSALLVDAGGLIDLAKSQFGNFAVDAKLLTP
GAIAPNLTGRDVLARVVLNGAFATPTVDYKLRAAALGFGETSVQNLYAEGLAKVNADRIL
VPVKARAKRIAGLNAAVGGLTTNVAIQGDFAIAMPNILSDNLRIRSDNIDATAVVVANLN
TGRYTGALKGRVNNYRVESIGIINLTTDANLVATPGGFGMKGRVVARTSQIFNEGARNFL
GGNAIVRADVEYSPQGIVTFSGLRLAAPQFRVTRGSGRYNPANGALAVEADAYSNQYGPI
TARVTGSQTNPVIVLRAARPGVGVGLANLQARVVGQNGAYAVNASGDTNYGPFTANVLVS
TGRQLAVDIRSLVFAGINTTGRLVQTAAGPFAGTLQFAGQGINGRAQLSDQGGNQRADIA
ARAYNARVPGMVDFTIGRAIVNASVVMLPGAPQIVADAQLADTRYGEVVIQSARAKVNYT
GGRGTAQAVLTGSSSIPFNIALNAQLAPNNYLVAAKGQANGINFRTANPARIQNVKGEWQ
VTPTRIDFGRGSVLVAGSYGNGLKAQARLDKLQLSILDAFVPNLGISGEASGALDFAQAR
DASFPAAEARLTIANFRRTGLAAVSESVDIVFAGRLVPDGGEARALIRRGQMVVGRMVAN
LRPLPPGNGGWVNRLMQAPLSGGIRYNGPSAVLFSFAALPNQQLSGPIAVAADFGGRVSS
PQLNGLIRADNLTYDNEAYGTRLTNMQLAGRFNNDRLEITRLQAKAGEGTIQAQGSIGLA
ADSGYPVDIRAQLNNARLADSDALAATTSGTIRLTHNRDGGLIRGDLTVPNARYQIIRQG
QAEVPELTGVRRRSEIRTPRPTDRPAPAAPPGLFRLDLRVRADNQLFVSGMGLESEWEMD
LRIGGTSAAPTINGGLDLVRGTYSFAGKRFEVNRGTIRFRGGALTDPDINIQATTTTDGI
TAVINVTGTGQRPQISFTSTPTLPQDEVLSRLLFGTNPENLSATEAIQLAAALNSLRGSG
GGGLNPLGKLRSATGFDRLRVLGADEATGRGTSLAAGKYITDNIYVEIVTDARGFTATQL
QIALTRTLSLLTQTGSFGGSAASLRYSRDF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaacagaccatggccgccgaacccgtcaacgagacggtcatcgtccgtcgc
cccgtatggcagcgcgtgctcaaatggatcggcatcgcgatcctggggctgatcctgctg
gtcggggcgatccttctgggcatcaacaccgatccgggccgccgcttcgtcgcggaccag
ctgggcggctataccaccgcctcgggcctgaacatcaaggtcgggcggatcgagggttcg
ctctatggccggatgaacttggtcgacctgcgggtcagcgaccccaagggcgtgttcctg
tcgagcccgcgcctcgcggtcgactggcggcccttcgcctataccaagaaccatgtcgat
gtccgctcgctgaccgccgacctcgtaacgctggcgaggcggcccgagctgaagccgacg
cccagcgatcccaacgcgccgctgctccccgatctcgacatcgacgtgaaccgtctggcc
atcaagcgcttcgtgatcggtgcgccggtgacggggcagcgtcacatcctggcgatcgac
ggcaaggtgcatatcgccgaccgccgtgcgcaggtgacggcgagcgcggatgcgctgcgc
gggcccggtatcgcgggcggcgaccggctccgcctggtcctcgatgcggtgcccgatgcc
gaccggctggcggtggacgtcaagctgaccgcgccgaccggcggcgtcgtcgcctcgatg
gcggggctgaaggcgccgatgaccgtgaccgtcgacggacgcggcgggtggaaagcctgg
caggggcgtgccatcgccacgctgggcggcggcgagctcgccaatctgaacgccacggcg
cgcgatggtcatatcgaggttcggggcgtgacccgccccggcctgtaccttgaacgcccg
gtcgagcggctgaccgcgcctgcgctccaggtcgcgatcgacaccacgctgaacgagcgg
cgggcggacacgcggatgaagctgcgttcctcggcgctgctggtcgatgcgggcgggctg
atcgatctggccaagagccagttcggcaatttcgcggtcgatgccaagctgctgacgccc
ggcgccatcgctcccaatctgacgggccgcgacgtgctggcgcgcgtggtgctgaacggg
gcgttcgcgacgcccacggtcgactataagctgcgcgccgccgcgctcgggttcggcgaa
acctcggtccagaatctctatgccgagggtctggcgaaggtgaatgccgatcgcatcctg
gtgccggtcaaggcgcgggcgaagcggatcgcggggctgaacgccgccgtcggcgggttg
accaccaatgtcgcgatccagggcgattttgcgatcgccatgcccaatatcctgtcggac
aatctgcgcatccggtcggacaatatcgatgcgaccgccgtggtcgtcgcgaatctcaat
accggccgctacaccggtgcgctgaagggccgggtcaacaattaccgggtcgagagcatc
ggcatcatcaacctgacgaccgacgccaatctggtggcgacgccgggcggcttcgggatg
aagggtcgggtggtcgcccgcacctcgcagatcttcaatgagggcgcgcgcaacttcctg
ggcggcaatgcgatcgttcgcgccgatgtcgagtatagcccgcaaggcatcgtgaccttc
agcggcctgcggctggccgcgccgcaattccgcgtgacgcggggcagcgggcgctacaat
cccgccaacggcgcgctggcggtcgaggcggatgcctattccaaccaatacggcccgatc
accgcacgggtgacggggtcgcagaccaatccggtgatcgtgctgcgcgcggccaggcca
ggcgtcggggtcggcctcgccaatctccaggcgcgggtcgtggggcagaacggcgcctat
gccgttaatgccagcggtgacaccaattacggtcccttcaccgccaatgtgctggtcagc
accgggcggcagctggcggtcgacattcgcagcctggtctttgccgggatcaacacgacc
gggcggctggtgcagacggcggcggggccatttgcggggacgctgcaatttgccgggcag
gggatcaacggccgcgcccagctgtccgatcagggcggcaaccagcgggccgatatcgct
gcgcgggcctataatgcccgcgtgcccggcatggtcgatttcaccatcggtcgcgccatc
gtcaacgccagcgtggttatgctgccgggcgcgccgcagatcgtcgccgacgcgcaactg
gccgacacccgctatggcgaggtggtgatccagtcggcgcgtgcgaaggtcaattatacc
ggcggacgcggcaccgcgcaggcggtgctgaccggatcatcgagcattccgttcaatatc
gcgctcaatgcgcaacttgcgccgaacaattatctggtcgcggccaaggggcaggcgaac
ggcatcaatttccgcaccgccaaccccgcgcgcatccagaatgtgaagggcgagtggcag
gtgacgccgacccggatcgacttcgggcgcgggtcggtgctggtcgcggggtcctatggc
aatggcctgaaggcgcaggcgcggctggacaagctgcaactgtcgatcctcgacgccttc
gtccccaatctcggcatttcgggcgaggcgagcggcgcgctcgacttcgcgcaggcgcgc
gacgccagcttccccgccgccgaggcgcggctgaccatcgcaaatttccggcgcaccggc
ctcgccgctgtgtcggagtcggtggacatcgtattcgcaggccgtctggttcccgatggc
ggcgaggcgcgcgcgctgatccggcgtgggcagatggtggtcggccgtatggtcgcgaac
ttgcgtccgctgccgccgggcaatggcggctgggtcaaccggctgatgcaggcgcccctg
tcgggtggcatccgctacaacggtccctcggcggtgctgttctccttcgcggcgcttccc
aaccagcagttgagcggcccgatcgcggtcgccgccgatttcggcggacgcgtgtcgtcg
ccgcagctcaacggcctgatccgcgccgacaacctgacctatgacaatgaggcatacggc
acccgcctcaccaacatgcagctggcgggccgcttcaacaacgaccggctggagattacc
cggttgcaggccaaggcgggcgaggggacgatccaggcgcagggctcgatcggccttgcg
gcggacagcggctatcccgtcgacatccgcgcgcagctcaacaatgcacggctggccgac
agcgatgcgctggccgcgacgaccagcggcacgatccgcctgactcacaaccgcgacggc
ggcctgatccggggcgacctgaccgtgcccaatgcgcgctatcagatcatccgccagggt
caggccgaggtgcccgagctgaccggcgtgcgccgtcgcagcgagattcggaccccgcgt
ccgaccgaccgacccgcgcccgccgcccccccggggctgttccgcctcgacctgcgggtg
cgggcggacaaccagctgttcgtctccggcatggggctggagtccgaatgggagatggac
ctgcgcatcggcggcaccagtgcggcgccgacgatcaatggcgggctcgacctggtacgc
ggcacctacagctttgccggcaagcggttcgaggtgaatcgcggcacgatccgcttccgt
ggcggcgcgctgaccgatccggacatcaacatccaggcgacgacgacgaccgacggcatc
accgcggtcatcaacgtcacgggcaccggccagcgtccgcagatcagcttcacctcgacg
ccgaccctgccgcaggacgaagtgctcagccggttgctgttcgggaccaaccccgagaac
ctgtccgcgaccgaggcgatccagctggccgccgcgctcaactcgctgcgcgggtcgggc
ggcggcgggctgaacccgctgggcaagctgcgctcggcgaccgggttcgaccggctgcgc
gtgctgggtgccgacgaggcgaccggccggggcaccagcctggcggcgggcaagtacatc
accgacaatatctatgtggagatcgtcaccgatgcgcgcggcttcaccgccacccagttg
cagatcgcgctgacccgcacgctcagcctgctgacccagaccggctcgttcggcggatcg
gcggcgagcctacgctattcgcgcgatttctga
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