Sphingomonas sp. LK11: AV944_06345
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Entry
AV944_06345 CDS
T04954
Name
(GenBank) TetR family transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
splk03000
]
AV944_06345
Transcription factors [BR:
splk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AV944_06345
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GFIT
Motif
Pfam:
TetR_N
TetR_C_31
TetR_C_6
DUF5867
TetR_C_28
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
APX65527
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Position
complement(1314815..1315372)
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AA seq
185 aa
AA seq
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MADRSARRNDPERRQRIIAAALEVIAEHGVPATTHRRIAAAAGVPLGSVTYYFTSLEALL
TDAFTQLAEESSHAFATRMAQAQSRDDAREAIIDIIAGSVWAEPRTLLLSYELYAFAARH
PSVSTVMQGWMNNSRAALERFFDPLTARALDALVEGIGIHNSIDPAPLDRNAISDIVHRI
TGDAA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgatccgcgcgacgaaatgacccggagcgtcggcaacgcatcatcgccgcc
gcgctggaggtgatcgcggaacatggcgtgcccgccaccacccatcgccggatcgcggcg
gcggcgggggtgccgctcggctcggtcacctattatttcacctcgctggaggcgttgctg
accgacgccttcacgcaactggcggaggaatcgtcgcacgccttcgccacccgcatggcc
caggcccagagccgcgacgatgcgcgcgaggcgatcatcgacatcatcgcagggtcggtc
tgggccgaaccgcgcacgctgctgctcagttacgaactctatgcctttgccgcgcgccat
ccttcggtttcgaccgtcatgcaggggtggatgaacaacagccgcgccgcgctggagcgg
ttcttcgatccgctgaccgcccgtgcgctcgatgcgctggtcgaggggatcggcatccac
aactcgatcgaccccgcccccctggaccgaaatgcgatcagcgacatcgtgcatcggatc
accggcgacgcggcgtga
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