Sphingomonas sp. LK11: AV944_06950
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Entry
AV944_06950 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_06950
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
APX65630
LinkDB
All DBs
Position
1430445..1433354
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AA seq
969 aa
AA seq
DB search
MKRHVLLLSVTPWALLAAPAMAQTSTDAQTTQAADPNAPIETQTAVGIRQDVAEVPDRSP
VQASTTGLSETPADPRDIVVTGFRASLGSAQAIKRNSDAILDAIVAQDIGKLPDNTAAES
LARVTGIQVSRYSDEVTQVLVRGLPDVATTFNGRDIFTAEGRGVALQDFPAGALAGLEVY
KSGTADLREPGLAGLINVRSRRPFDFEKGFTIAGGVRGTYNDQSKKFDPLGNLLLSQRAE
TPIGEIGWLINAVYTQAQYRNAVRWGEGNTNKPTAGTTILPSSVGRDFQIPTAVGVYNDS
GKRWRPAMNASVQWRPAHNLELYYDFLYQSYRGEVANDWFRVPLLDSNPTLSDVVLRPGE
PLQVQSLTKTGGYRPEAFRSTVKAYTDTYQAAGGAKWDIGRAHLSTDLAYTFSQYGSDEW
SFDTAFSKAPVANVNFFVNDGVSFDLPGFDNSNPANYIWRGYFEATYRVQGKGWQWRTDV
DLETDLSLFPKLQFGIRWTDRDASLKRGNRYAYTEPLAIPLAQVPAGNLGLTQNAFRGNQ
GFTSWLMPSRDGIAGNAPQLRQYAFDALQRLVAGNPADQGYRDALNRFSTTEVQLDPLAA
FYATEQTYAFYGQAKYEFNIGSIRFDGMIGTRVVNTVGEYSGISTVLFDGVRRSEVRRTR
ANYVDILPNISLRIRPSDKLQIRFGVTKTRTKPQFSQLNPALNITQNTQQVVPDQPLDPR
FPAGLNTRPNAYGGGGNPDLRPLISNNYDATVEYYFSPTASLTAAAFYRDLDGFIGNYIN
RTIDPFYGLIEISRPENAGKGRIKGIEVGGQTFFDFLPGLWSGIGVQANVTYLEGKQQYP
ANLFASTGGTTAPPFVPIPGLSKWTYNIALFYEKGDVSTRLSFNNRDAYLNGNFINGDGF
YNGEGTTRIQRLDFGFNYNITKEITVAFDVANILAKPFNNYRSYGNGLSYPRDVRDEGRY
YGAGLRFRF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcacgtccttttgctgtccgtcacgccatgggcgttgctggcggcgcccgcc
atggcccagacgtcgaccgacgcgcagacgacccaagccgccgatccgaacgccccgatc
gagacgcagaccgccgtcggcattcgtcaggatgtcgccgaagtgccggaccgcagcccc
gtccaggcctcgaccaccggcctgtccgaaacaccggccgatccgcgcgacatcgtcgtc
accggcttccgcgccagcctgggttcggcgcaggcgatcaagcggaattccgacgcgatc
ctcgacgcgatcgttgcgcaggacatcggcaagctgcccgacaatacggcggctgagtcg
ctggcgcgcgtgaccggcatccaggtcagccgctacagcgacgaagtgacgcaggtgctg
gtccgcggtctgcccgacgtggcgacgaccttcaacggccgcgacatcttcaccgccgaa
ggccggggcgtcgcgcttcaggatttcccggcgggtgcgctggcgggtctcgaagtctac
aagtcgggcaccgccgatttgcgggaaccgggtctggcaggcctcatcaacgtgcgttcg
cgtcggccgttcgatttcgaaaagggcttcacgatcgcgggcggcgttcgcggcacctat
aacgaccagtcgaaaaagttcgatccgttgggcaacctgctcctcagccagcgtgccgaa
acccccatcggtgagatcggctggctgatcaacgccgtctatacccaggcgcagtaccgc
aacgcggtccgttggggcgagggcaatacgaacaagccgacggccgggacgaccatcctt
ccgagctcggtcggccgcgacttccagattccgaccgcagtcggcgtctataatgacagc
ggcaagcgctggcgcccggcgatgaatgccagtgtccagtggcgtccggcgcacaatctc
gaactctattacgacttcctctatcagagctatcgcggcgaagtcgcgaacgactggttc
cgtgttccgctgctcgacagcaatccgacgctgagcgatgtcgtgctgcggcccggcgaa
ccgcttcaggtgcagagcctgaccaagaccggtggttatcgtcccgaagcgttccggagc
acggtcaaggcctacacggatacgtaccaggcggcgggcggtgccaaatgggatatcggt
cgtgcgcatctgtcgaccgacctggcctataccttctcgcaatatggctcggacgagtgg
agcttcgacaccgccttttccaaggcgcccgtcgccaacgtcaacttcttcgtcaacgat
ggcgtatcgttcgacctgccgggcttcgacaacagcaacccggccaactatatctggcgc
ggttacttcgaggcgacctaccgcgtgcagggcaaggggtggcaatggcgcaccgacgtg
gacctggaaaccgatctgtcgctgttccccaagctgcaattcggtatccgctggaccgat
cgcgatgcctcgctgaagcgcggcaatcgctatgcctataccgagccgttggcgattccg
ctggcgcaggtgccggccggtaatctggggctgacccagaatgcgttccgcggcaaccag
ggcttcaccagttggctgatgccatcgcgtgacggcattgcgggcaatgcgccgcagctt
cgccaatatgcctttgacgcgctgcagcggctggtggcgggcaatcccgccgatcagggc
tatcgcgacgcgctgaaccgtttctccacgaccgaggttcagctggacccgttggccgcc
ttttatgccaccgaacagacctatgccttttacgggcaggcgaaatacgagttcaacatc
ggctcgatccggttcgacggtatgatcggcacccgcgtcgtcaacacggtgggcgaatat
agcggtatctcgacggtgttgttcgacggcgttcgccgcagtgaggtgcgccgcacccgc
gccaattatgtcgatatcctgcccaacatctccctgcgtattcggccgagcgacaagctg
cagattcgcttcggcgtaacaaagacgcggaccaaaccgcagttcagccagttgaacccg
gccctgaacatcacccagaatacgcaacaggtcgttcccgaccagccgctcgacccgcgc
ttcccggcggggctgaacacccggcccaacgcctatggcggcggcggcaatccggatctg
cgcccgctgatctccaacaattatgacgcgacggtcgaatattatttctcgccgaccgct
tcgctgacggcggccgctttctaccgcgatctcgacgggttcatcggcaattacattaat
cgcaccatcgacccattctatggcctgatcgaaatcagccgtccggaaaatgcgggcaag
ggtcgcatcaagggcatcgaagtgggtggtcagaccttcttcgacttcctgccggggctg
tggagcggtatcggcgtccaggcgaacgtcacctatctggaagggaagcagcaatacccg
gccaatctgttcgcctcgaccggcggcaccaccgcgccgccgttcgtgccgatccccggc
ctgtcgaagtggacctataatatcgctctgttctatgagaagggcgatgtctcgacccgc
ctgtcattcaacaaccgcgatgcgtatctgaacggcaatttcatcaacggcgacggtttc
tataacggtgaaggcacgacccgcatccagcggctcgatttcggtttcaactacaacatc
accaaggaaatcacggtggccttcgatgtggccaatattctggccaagccgttcaacaat
tatcgcagctatggcaacggcctgtcctatccgcgcgacgtgcgtgacgagggccgttat
tacggcgcgggcctgcgcttccgcttctga
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