Sphingomonas sp. LK11: AV944_07385
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Entry
AV944_07385 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_07385
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_07385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APX65699
LinkDB
All DBs
Position
complement(1555406..1557538)
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AA seq
710 aa
AA seq
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MFKPVLLSGLSATALASLLAAPATAQTTNATTTNRGREIVVTAPVQQSEADVLSGTSIVT
GAELERSIRPTIGETLARQPGVSATSFGPNASRPVLRGFQGERIRVLTDGIGSIDVSNTS
VDHAVVINPLLAERVEVLRGPSALLFGSSAVGGVVNVIDTRIPRVVPEKGYRLSGMATYG
SAATERSVASAADVAVGKQFVLHADGSYLKTDDLKIGGYVLSPRARAEAQASAAKAPNDP
LNFAGVANLRGRLPNTASETWTAGVGGSLITDTGSLGIAYSHYDSLYGVPVRYALTPGSE
EPEAPRLSLVQNRLDLRGEIETGGGFLDRIRLRAGAAEYRHFELEESGEVGTAFYNKGIE
SRLELVQTKRNGWQGASGVQFFNRDFDVRGEEAFLPRNNTAQVGLFTLQQLDRGAFKMEA
GARYEHTSLTARTAVSDNRFFRGQRSFDAFSGSIGASYGFAPDWRAGLNLSRTERAPSAE
ELFANGPHAGTEAYELGNPDFKKESSWGIEATVHGHGEGYSFDASAYYNRFSNYIYDALV
QQGPCEAAAAPSGREVDLPCFTYAQADARYYGIEAEGSLRLATIGGYAINADLLGDYVHA
QIIGTGPAPRIPPLRLLGGLEAHSDSVNARVEVERSFKQSRVLGLETPTDGFTLVNASVQ
LKPWGTVNPTTLTLSANNIFDVDARRHASVLKDFAPLAGRDLRATLSFKL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaagcccgtcctcctgtccggcctgtccgccaccgcgcttgccagcctgctggcc
gctcccgccaccgcgcagaccaccaatgccacgactaccaatcgtggccgcgaaatcgtc
gtgaccgcgccggtccagcagtcggaggccgatgtgctgtcgggcacctcgatcgtcacc
ggcgcggagctggaacgctcgatccgaccgaccatcggcgagacgctggcgcggcagccg
ggcgtgtcggcgacgtcgttcggccccaatgcctcgcgccccgtgctgcgcggtttccag
ggcgagcgtatccgcgtgctgaccgacgggatcggttcgatcgacgtgtcgaacaccagc
gtcgaccatgccgtcgtcatcaacccgctgctcgccgagcgggtcgaggtgctgcgcggt
ccctctgcgctgctgttcggatcatcggcggtgggcggcgtggtcaacgtcatcgacacg
cgcattccgcgtgtcgtgccggaaaagggctatcgcctgtcgggcatggcgacctatggc
tcggccgcgaccgaacgttcggtcgcgagcgcggcggatgtcgcggtcggcaagcagttc
gtgctgcacgccgatggctcgtatctgaagaccgacgatctgaagatcggcggctatgtc
ctatcgccgcgtgcccgtgccgaggcgcaggcctcggcggcgaaggcccccaatgacccg
ctcaactttgcgggtgtcgccaacctgcgcggccgcctgcccaacaccgccagcgaaacc
tggacggcgggggtcggcgggtcgctgatcaccgacaccggctcgctgggcatcgcgtac
agccattatgacagcctgtacggcgtgccggtccgctacgccctgacgccgggcagcgag
gaacccgaagccccgcgtctcagcctggtccagaaccgcctcgacctgcgcggcgagatc
gaaacgggcggcggcttcctcgaccgcattcgcctgcgcgccggtgccgccgaatatcgc
catttcgagctggaggagagcggcgaggtcggcaccgccttttacaacaagggcatcgaa
agccgcctggaactggtccagaccaagcgcaatggctggcagggcgcgtcgggcgtgcaa
ttcttcaaccgcgacttcgacgtgcgcggcgaggaggcgttcctgccgcgcaacaacacc
gcgcaggtgggcctgttcacgctgcaacagctggatcgcggcgccttcaagatggaggcc
ggggcgcgctatgagcatacctcgctgaccgcacgcacggcggtcagcgacaaccggttc
ttccggggccagcgcagcttcgatgccttttcgggctcgatcggtgccagctacggcttc
gcgcccgactggcgggcgggcctgaacctgtcgcgcaccgaacgcgcgccctctgccgag
gagctgttcgccaacggcccgcacgccgggaccgaagcctatgaactcggcaatccggac
ttcaagaaggagtcgagctggggcatcgaagccaccgttcacgggcatggcgaaggctat
agcttcgacgcctcggcctattacaaccgcttctctaactatatctatgacgcgctggtc
cagcagggtccgtgcgaagccgccgctgcgccctcgggccgcgaggtcgacctgccctgc
ttcacctatgcccaggccgatgcccgctattacggcatcgaggcggagggctcgctgcgg
ctggccacgatcggcggctatgcgatcaatgccgacctgctgggcgattatgtccatgcc
cagatcatcggcaccggcccggccccgcgtatcccgccgctgcgcctgctcggcgggctg
gaagcgcattcggacagcgtgaacgcgcgtgtcgaggtggaacgcagcttcaagcagagc
cgcgtgcttgggctggaaacaccgaccgacggcttcacgctcgtcaacgcctcggtccag
ttgaagccctggggtacggtcaatccgacgacgctgaccctgtcggcgaacaacatcttc
gatgtcgatgcccgccgccacgccagcgtcctgaaggacttcgccccgctggccggtcgc
gacctgcgcgcgacgcttagcttcaagctctga
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