Sphingomonas sp. LK11: AV944_07900
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Entry
AV944_07900 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_07900
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_07900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APX65773
LinkDB
All DBs
Position
complement(1663588..1665720)
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AA seq
710 aa
AA seq
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MNVLNGAASLAALLVCAPAMAATTDPIGDIPPPGEDIVVTGRAQHLYRVDTTTVGKTAED
PLNIPQALQVINEELFTDQGARDATDIYRNISGVSAFSYAGITFRGFRQDQSFYDGQRGN
PFIGFSVPQLFTVSRVEVLKGPAGLFFGPGSPGGIINYVSKTPNEVSALRTVATLGNYGR
AGISSEATGKVDANGVVTYRLGGFYEAMTPFRYNTKNKSLIGDGGLSFRTNQGGKLTVQA
TVYDNFLRGNRLRGVPVDNDGNFLGDIRWNANEPTDFLHLKSQAYQARYVTDIGDAITFD
AGARYFKAMETQQYHEARGFVSGSSDLIAREFRDQIRDVDGLSFMANATAKVPLFGMVHK
FQAGADWYDETSILNSRILRSGVTPLSLSKPVYTMTGRDVARAAALPFETSNTRSRRTGA
YLQDQVTVTDALLLVGGVRYDRFDDTVATNRRRGGPPTNDSYSDGRFTYRAGAIAKPRKD
VSLYASWSGSFEPQSPASQNPDAGGPFAPVTGGQVEGGVKSVLMGGRLQANAAVYRIVRR
NMLQVDPSLAPINGQDQLRPIGQVTSKGFEIDLATDITPDWVLMANYGYNDTRITGTVPG
QSLTNAVGNRFANAPQHQLGFWTRYQIAPIGTAIGFGGEYLSSRISLSGQAVQPYTIFDA
SITKSLGIMELMLRVDNLFDKRYAASGFSLQSGSFPGEPRTLLAELRFRF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcttgaacggtgcggccagcctggccgccttgctggtctgtgcgcccgccatg
gcggccacgacggaccccatcggagacatccctccgcccggcgaggacatcgtcgtgacc
gggcgggcgcagcatctctaccgtgtcgatacgacgactgtcggcaagacggccgaagac
ccgctgaatattccgcaggcccttcaggtcatcaatgaggagctgttcaccgatcagggc
gcgcgcgacgcgaccgatatctatcgcaacatctcgggcgtcagcgccttcagctatgcg
ggcatcacctttcgcggctttcggcaggaccagtccttttatgacggtcagcgcggcaat
ccctttatcggcttttcggtgccgcagttgttcaccgtcagccgggtcgaggtgctgaag
ggaccggcgggcctgttcttcggccccggttcgcccggcggcatcatcaactatgtctcg
aagacgcccaacgaggtcagcgcgttgcgcacggtcgccacgctgggcaattacggtcgc
gcgggcatctcgtccgaggcgacgggcaaggtcgatgcgaacggcgtcgtcacctatcgg
ctcggcggcttctatgaggcgatgacgcccttccgctacaacacgaagaacaagtcgctg
atcggcgatggcggcctgtccttccgcaccaaccagggcggcaagctgaccgtgcaggcc
acggtttacgacaacttcctgcgcggcaatcggctgcgcggcgtgccggtcgacaatgac
ggcaatttcctgggcgatatccgctggaacgccaacgaacccaccgacttcctccatttg
aagtcgcaagcctatcaggcacgctacgtcactgacatcggtgacgcgatcaccttcgac
gcgggcgcgcgctacttcaaggcgatggaaacgcagcaatatcacgaggcacgcggtttc
gtgagcggcagttccgacctgatcgcgcgcgagttccgcgaccagatccgcgacgtcgac
ggtctgtccttcatggccaacgccaccgccaaggtgccgctgttcggcatggtccacaaa
ttccaggcgggcgccgactggtatgacgagaccagcatcctcaactcgcgcatcctgcgt
tcgggcgtgacaccactgagcctcagcaagccggtctataccatgaccggccgcgacgtg
gctcgcgctgccgccctgcccttcgagacgtcgaacacgcgcagccggcgtacgggtgcc
tatctgcaagaccaggtcaccgtcaccgacgcgctgctgctggtcggtggggtccgttac
gaccgatttgacgacaccgtggcgaccaaccgtcgccgcggcgggccgcccacaaacgac
tcctacagcgatggccgcttcacctatcgcgccggggcgatcgccaagccgcgcaaggac
gtgtcgctttacgccagttggtcgggcagtttcgagccgcagagcccggccagccagaat
cccgatgcgggcggccccttcgccccggtcacgggcgggcaggtcgaaggcggcgtcaag
tcggtgctgatgggcgggcggcttcaggccaatgcggccgtctatcggatcgtccgccgc
aacatgcttcaggtcgaccccagcctggcccccatcaacgggcaggaccagctccgcccg
atcggccaggtgacgagcaaggggttcgagatcgatctggcgaccgacatcacgcccgac
tgggtgctgatggccaattacggctataacgacacccggatcaccggcaccgttccgggc
cagtcgctgaccaacgcggtcggcaaccgcttcgccaatgcgccgcagcaccagctcggc
ttctggacgcgttaccagatcgcgccgatcggcaccgcgatcggctttggcggcgaatat
ctgtcgagccggatcagcctctctggccaggcggtgcagccctatacgatcttcgatgcc
tcgatcaccaagtcgctgggcatcatggagctgatgctgcgcgtcgataacctgttcgac
aagcgctatgccgcctccggcttctcgctgcaaagcggcagcttcccgggcgaaccacgg
accctgctggcggaattgcggtttcggttctga
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