Sphingomonas sp. LK11: AV944_08035
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Entry
AV944_08035 CDS
T04954
Name
(GenBank) GntR family transcriptional regulator
KO
K19775
GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
splk03000
]
AV944_08035
Transcription factors [BR:
splk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AV944_08035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Rrf2
HTH_41
Sca2
TrmB
HTH_46
Motif
Other DBs
NCBI-ProteinID:
APX65795
LinkDB
All DBs
Position
complement(1710192..1710944)
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AA seq
250 aa
AA seq
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MDNNTTQDRLYRELARTLITELQEGRYPIGTRMPAERELATRFDVSRPVIREALIALEVQ
GFIEVRIGSGAHVVALPGQGETPDFGVSAMEVAEARLLFEPEAAALAASQITDSELDELA
TLVDAIEEENNTVGGAFHADRAFHTLIARSTRNSAILETIDRLWEQRLRSAESVLLDAKV
REIDVRPIVEHHAAILEALRSRDAVAARVAMQRHLTAALEGLLIASEARAVAEVRQALAA
KRDRTAHLKI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaacacgacccaggaccggctctaccgggaactcgcccgcacgctgatcacc
gagttgcaggaggggcgctacccgatcggtacgcgcatgcccgccgaacgcgagctggcg
acgcggttcgacgtcagccgtccggtcatccgcgaggcgctgatcgcactggaagtccag
ggtttcatcgaggtgcggatcgggtcgggcgcgcatgtcgtggcgctgccgggtcagggc
gagacgcccgatttcggcgtgtccgcgatggaagtggccgaggcgcgcctgttgttcgag
cccgaagcggcggcgctggcggcgtcgcagatcaccgacagcgaactcgacgaactggcg
acgttggtcgatgcgatcgaggaggagaacaacacggtcggcggcgcctttcatgccgac
cgcgccttccatacgctgatcgcccggtcgacgcgcaacagcgcgatcctggagacgatc
gaccggctatgggaacagcgactgcgctcggccgagagcgtgctgctcgacgccaaggtc
cgcgagatcgatgtgcgcccgatcgtcgagcatcatgccgcaatcctggaggcattgcgc
tcgcgcgatgccgtggcggcacgggtcgcgatgcagcggcatttgacggcggcgctcgag
ggcctgctgatcgccagcgaagcccgcgcggtggccgaggtgcgtcaggccctggcggcg
aagcgcgaccggacggcgcatctgaagatttga
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