Sphingomonas sp. LK11: AV944_08230
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Entry
AV944_08230 CDS
T04954
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
splk03029
]
AV944_08230
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_08230
Mitochondrial biogenesis [BR:
splk03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
AV944_08230
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
APX65824
LinkDB
All DBs
Position
1754538..1757279
Genome browser
AA seq
913 aa
AA seq
DB search
MTGMKTVRAGAMLLAGTMLSGVPVMAQTAPAAPSAGAGAVPTQAVAPAPVRTIKTLRVEG
AQRIEPETVLSYTKLRVGIPYTPETLDQALKDLQASELFADFSISGVETGDIVLRVRENP
IINRVILEGNKRLKEDKIKKEIKLSPRQIFTRTAVRQDVARIVELYRRQGRFGAVVEPKM
VNLDQNRVDVVFEISEGPKSKVRQINIIGNEKFSDDELRGAMYTKQSRWFRFLSSATSYD
QDRLAADQQKLRLFYLTNGYADFRVTSAVAELTPDKKDFIITYVVEEGPRYKFGDVKVDS
QIRDFDNEKLAQSLPMKKGDWYNAKLIEDSIDSLSQTAGLFGYAFTDVNPDFQRDKDTLT
MAITFNIAEAKRTYVERIDINGNTQTQDKVVRREIRVAEGDAFNSFQVRRSQDRINSLGY
FQEKLEIKQNPGSTPDRIVLETNVEEQSTGSLQLSAGYSSLERFIIQANITQRNFRGKGQ
ELRAGVNYSAYSKSIELGFTEPYVFDKNIALGVDVFRRDFNSFNYLGTTRQTTYSQVSTG
FQVRAGVPLTEYWSLSGRYGLTYDQVGLDASFFNADGTCNFQQAGRYLCDSIGNRWTSSV
GYSLIYDSLNSRLRPTAGHRFSFSQDFAGLGGDVKYIRTRAEGAKFKGLGKGFVFSILGE
GGYIHSLEGSRGPGIDPVRIVDRFYLGEPQFRGFDIRGVGPRVLRVPYVIGNDGSQSLSK
DRQQFVDDALGGRAYYLARAELEIPLGSGAREMGLRPSVYVQAGSLWGVTRPQPSLDFQQ
LVVNGVPQFNKDGSKTLIPSPVRDRAGNLLYQVPTTTETTAAGIAGASTTCPTGYSATAG
GTCLGTTANVALQNTNYAEEQFYLGTWKPRVSIGIGVNWNSPFGPLRIDLAKALVTQPGD
DPKLITFNVGTQF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtatgaagactgtgcgcgcgggcgccatgctgctggcgggcacgatgctgtcg
ggtgttcccgtcatggcgcagaccgcgcctgccgcgccgagcgcgggggccggtgctgtc
ccgacgcaggccgtggcgcctgcgccggtgcgcacaatcaagacactgcgggtcgaaggc
gcccagcgtatcgagcccgagacggtgttgtcctacactaagctgcgggtcggcattccc
tataccccggaaacgctcgaccaggcgctgaaggaccttcaggcgtccgaactgttcgcc
gacttctcgatctccggcgtggagacgggcgacatcgtgctgcgcgtgcgcgagaacccg
atcatcaaccgggtcatcctggagggcaacaagcgcctgaaggaagacaagatcaagaag
gagatcaagctgtctccccgccagatcttcacccggaccgcggttcgccaggacgtggcg
cgtatcgtcgaactgtaccgccgccagggccggttcggcgcggtggtcgagccgaagatg
gtcaatctcgaccagaaccgcgtcgacgtggtgttcgagatcagcgaagggccgaagtcc
aaggtccgccagatcaacatcatcggcaacgagaagttctccgacgacgaactgcgcggc
gcgatgtacaccaagcagtcgcgctggttccgtttcctgtcctcggccaccagctatgac
caggatcgcctggccgccgatcagcagaagctgcgcctgttctacctgaccaacggctat
gccgatttccgggtgacgagcgcggtcgccgagctgacgccggacaagaaggacttcatc
atcacctatgtggtggaggaaggcccgcgctataagtttggcgacgtcaaggtcgacagc
cagatccgcgacttcgacaatgagaagctcgcccagtcgctgcccatgaagaagggcgac
tggtacaatgccaagctgatcgaggactcgatcgacagcctcagccagacggcgggcctg
ttcggctatgccttcaccgatgtgaaccccgacttccagcgtgacaaggacacgctgacg
atggcgatcacgttcaacatcgccgaggccaagcggacctatgtcgagcggatcgacatc
aacggcaacacgcagacgcaggacaaggtcgtccgccgcgaaatccgcgtggccgagggt
gacgccttcaacagcttccaggtccgccgcagccaggatcgcatcaactcgctcggctat
ttccaggaaaagctggagatcaagcagaaccccggctcgacgcccgaccgcatcgtgctg
gagaccaatgtcgaggaacagtcgaccggttcgctccagctgtcggccggttactcgtcg
ctggaacgcttcatcatccaggcgaacatcacccagcgcaacttccgcggcaagggccag
gaactccgcgccggtgtgaactattcggcctattccaagtcgatcgaactgggcttcacc
gagccttatgtgttcgacaagaatatcgcgctgggcgtcgacgtgttccgtcgcgacttc
aactcgttcaactatctgggcaccacccgccagacgacctacagccaggtgtcgaccggc
ttccaggtgcgcgcgggcgtgccgctgaccgaatattggtcgctgtcgggtcgctatggc
ctgacctatgaccaggtcggcctggacgcgtcgttcttcaacgcggacggcacctgtaac
ttccagcaggcgggtcgctatctctgcgactcgatcggcaatcgctggacctcgtcggtc
ggctactcgctgatctatgacagcctgaacagccgcctgcgtccgactgccgggcatcgc
ttctcgttcagccaggactttgccggtctgggcggcgacgtgaagtatatccgcacccgc
gcggaaggcgccaagttcaaggggctgggcaagggcttcgtcttctcgatcctgggcgag
ggcggttacatccactcgctcgagggcagccgtggtccgggcatcgatccggttcgtatc
gtcgaccgcttctatctgggcgagccgcagttccgcggcttcgacattcgcggcgtcggt
ccgcgcgtgctgcgcgtgccctatgtcatcggcaacgacggcagccagtcgctgagcaag
gaccgccagcagttcgtcgacgacgcactgggcggtcgtgcttactatctggcgcgtgcg
gagctggaaatcccgttgggttcgggtgcgcgtgagatgggcctgcgccccagcgtctat
gtccaggccggcagcctgtggggcgtcacccgcccgcaaccctcgctcgacttccagcag
ctggtcgtcaacggcgtgccgcagttcaacaaggacggatcgaagacgcttatcccgtcg
cccgtaagagacagagctggtaatctgctttatcaggtcccgacgacgaccgaaacgacg
gccgcaggcatcgccggtgccagcacgacctgcccaaccggttactcggccacggcgggg
ggtacctgtttgggcacgacggccaatgtcgcgctccagaacaccaactatgccgaagag
caattctatctcggcacctggaagccgcgcgtgtcgatcggcatcggtgtgaactggaat
tcaccattcggaccgctgcgcatcgaccttgccaaggcattggtgacgcagccgggcgac
gaccccaagctcattactttcaacgtagggacgcagttctga
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