Sphingomonas sp. LK11: AV944_08695
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Entry
AV944_08695 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_08695
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
APX67558
LinkDB
All DBs
Position
complement(1854564..1856981)
Genome browser
AA seq
805 aa
AA seq
DB search
MLLGGTMLLSPLLAAPALAQSTTEPTAQTEAEPAAAPAQNDIVVTGTRAQGRSRLDSVSP
VDVLSGNALRAQGTTELAQALSSVAPSIDFPRQAAVDGTDAIRPATLRGLSPDQTLVLIN
GTRAHTSALLNINGSIGRGAAAVDLNTIPTVALDRVEVLRDGASAQYGSDAIAGVVNLRL
REARSGGGANVTFGTFATQYDAARTSRSVRDGESVTISGWKGFGLGSDGFLTLSGEYVAR
QPTNRADIDPRGPAPQRIRARFGDPQIEQGTVYLNAALPLGDSGWTAYANGGFQQRDSES
AAFPRVAGANAVNVEAVRGLYPDGFLPLIGTTSRDYNATGGVRGTIGDWNADLTVSYGRN
TIDFATLNSANSTYGNATLRDFDDGRLTYDQLVTGLDLSREYSLGAAVFNVAAGAEYRRE
GFKIEAGQPESYNRAPGAAANLASGAQGFVGFRPENQVDAHRSNGSLYLDVEAKLWDRLT
LGAAVRGESYSDFGETATAKFSARYDVAPWLAFRGTLSTGFRAPSLQQQYYTSTQTLVTN
GTILETGLYPVDSTLARTLGALPLEPEKSRNYSLGTVVRFGGFSLTVDGYRIRIRNQIVL
SENIQSSASAQVAGLLSPFGVQAARFFINGVQTTTKGLDIVAAYNWRNETLGNFNLSAAA
NINDLSVDRVPTSTAALNPAPSLFGRNRILTIEQGTPRTKIVGSVDWTRQAVGATLRAVH
YGDVLQPGSVVANDLYTGPRTIVDLEGRYRFNDNVSLALGASNLFDVYPRTTPAALNNNG
VTAFPYYSPFGFNGRQLYGRLNLTW
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttggcggcaccatgttgctgagcccgctgctggcggcacccgctctggcccag
agcacgaccgagccgaccgcccagaccgaggccgaacctgccgccgccccggcgcagaac
gatatcgtcgtgaccggcacccgcgcgcaggggcgcagccgcctcgactccgtgtctccg
gtcgacgtgctgagcggcaacgccctgcgcgcgcaaggaacgacggaactggcccaggcg
ctgtcgagcgtcgcgccctcgatcgactttccgcgtcaggcggcggtggacggcacggat
gcgatccgcccggccacgttgcgcggcctgtcgcccgaccagacgctggtgctgatcaac
ggcacgcgggcgcatacctcggcgctgctcaacatcaacggttcgatcggacgcggtgcg
gccgcggtcgacctcaacaccatcccgacggtcgcgctcgaccgagtggaggtgctgcgc
gacggcgcctcggcgcaatatggctcggacgcgattgcgggtgtggtcaatctgcggctg
cgcgaggcccgttcgggcggcggcgcgaacgtgaccttcggcaccttcgccacccaatat
gacgccgcgcgcacctcgcgatcggtacgcgacggcgagtccgtgacgatcagcggctgg
aagggcttcggcctaggcagcgacggcttcctgacgctgtcgggcgaatatgtcgcgcgc
cagccgaccaaccgcgctgatatcgacccgcgtggccccgcgccgcagcgtatccgcgcc
cgcttcggcgatccgcagatcgaacagggcaccgtctacctcaacgccgcgctgccgctc
ggcgacagcggctggacggcttacgccaatggcggtttccagcagcgcgacagcgaaagc
gcagccttcccgcgggtcgcgggggcgaacgctgtcaatgtcgaggcggttcgaggcctg
tatccggacggtttcctgccgctgatcggcacgacgtcgcgcgattataacgcgaccggt
ggcgtgcgcggtacgatcggcgactggaatgccgaccttaccgtcagctatggccgcaac
acgatcgacttcgcgacgctgaactcggccaattcgacctatggcaacgccacgctacgc
gacttcgacgatggtcgcctgacctatgaccagctcgtcaccgggctcgacctgtcgcgc
gaatattcgctcggcgcggcggtcttcaacgtcgcagcgggtgccgaatatcgccgcgag
ggcttcaagatcgaggcaggccagcccgaaagctacaaccgtgcgcccggcgcggccgcc
aatctggcgtcgggtgcgcagggttttgtcggcttccgcccggaaaaccaggtcgacgcg
catcgcagcaacggcagcctgtatctggatgtcgaggccaagctgtgggatcgcctgacc
ctgggtgcggccgtccgtggcgagagctattcggacttcggcgagacggcgaccgctaaa
ttctcggcccgctatgacgtcgcaccgtggctggccttccgtggcacgctgtccaccggc
ttccgcgcgccgtcgctgcaacagcaatattatacctcgacccagacgctggtgacgaac
ggcaccatcctggaaaccggcctctatccggtcgacagcaccctcgcccggacgctgggc
gcactgccgctggagccggagaagtcgcgcaactattcgctgggcacggtcgtgcgcttc
ggcgggttcagcctgacggtcgacggctatcgcatccgcatccgcaaccagatcgtgctg
tcggagaatatccagtcctcggccagcgcgcaggttgctggccttctgtcgccgttcggc
gtgcaggcggcgcgcttcttcatcaacggcgtccagaccaccaccaagggcctggacatc
gtcgccgcctataattggcgcaacgagacgctaggcaatttcaacctgagcgcggcggcg
aacatcaacgacctgtccgtcgaccgggtgccgacctcgacggccgcactgaaccccgcg
cccagcctgttcggccgcaaccgtatcctgaccatcgaacagggcacgccgcgcaccaag
atcgtcggctcggtcgactggacccgtcaggcggtcggcgcgacgctgcgcgcggtgcat
tatggcgatgtgctgcaacccggatcggtggtcgccaacgacctctataccggcccgcgc
accatcgttgatctggaggggcggtatcgcttcaacgacaatgtgtcgctggcgctgggg
gcgtcgaacctgttcgacgtctatccccgcacgacgcccgccgcgctcaacaacaatggt
gtgacggcattcccctattactcgcccttcggcttcaacgggcggcagctttacggacgg
ttgaacctgacctggtaa
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