Sphingomonas sp. LK11: AV944_08980
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Entry
AV944_08980 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_08980
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_08980
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
DUF7422
Motif
Other DBs
NCBI-ProteinID:
APX67568
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Position
1919518..1921269
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AA seq
583 aa
AA seq
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MTRNPTSELRIRANAVATTDREQGVNFSVSGPINEQLGYVVSAAYNNWDGNIRNLFNGKR
VNGRETLNLRGKLRWEPTDTAALVISGNYVNGNTTVGRPFLAFGPNARLRGTAGLTPSVV
LPGVVVGPDNQTISNNYDSRTRYEGGGGYIRGEFGIGSLNLVTISSYDRFHLNDYLDHDD
TSAPGNLGNNTQIGVFNSEQVTEEVRLQSDADKPFRYTVGLYGANVKFNRPFQRGPYFSL
ANWYATSQSRQVAAFAQVDWTIVPDLTFTGGGRVQNERVSYTFRDNLAGTAFAGHASDTA
GTYRGTLRYDFSPTINGFVTYATGYKGQTYDLTTGFNRNRALAGPIRPERSGDKELGIRS
QFLDRRLTANVTLFDTSYRDLQAQTIETLADGTSNYRLTNVGKLNTKGVEFEGSMRFSDS
FNLGGAVTYLDAKYTEFARAQCYPLQTAAQGCTGSPASQNLTDTTAIQAPKWKFNANLDY
SPRLTATTRGVAQVNWQYQSSLYFQARDPQTFQPAFSIVNVGLGVREEDRRWELVAFVNN
LFDKQYYGSLVNTAGNFGNNIATQAVLPRDFRRYAGMRLGLNF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
attacccgcaacccaacctcggaactgcgtatccgcgccaatgcggtggcgacgaccgat
cgcgagcagggcgtcaatttcagcgtgtccggcccgatcaacgagcagctcggctatgtc
gtgtcggccgcctataacaattgggacggcaatatccgcaacctgttcaacggcaagcgg
gtcaatggccgcgagacgctgaacctgcgcggcaagctgcgctgggagccgaccgatacg
gccgcgctcgtcatctcgggcaattacgtcaacggcaacaccacggtcggccgccccttc
ctggcgttcgggccaaatgcccgactgcgcggcaccgctgggctgaccccgtcggtcgtg
ctgcccggcgtggtcgtcgggccggacaaccagacgatcagcaacaattacgactcgcgc
acccggtacgagggcggcggcggctatatccgcggggagttcggcatcggttcgctgaac
ctcgtcacgatcagctcgtatgaccgtttccacctgaacgactatctcgaccatgacgac
acgtcggcgcccggcaatctgggcaacaacactcagatcggcgtcttcaattccgagcag
gtgaccgaggaggtccgcctgcaatccgatgccgacaagccgttccgctatacggtcggg
ctgtacggcgcgaatgtgaagttcaaccgcccgttccagcgcgggccgtatttctcgctc
gccaactggtacgccacctcgcagtcgcgccaggtcgcggccttcgcacaggtcgactgg
acgatcgtgcccgacctgaccttcaccggcggcgggcgcgtccagaacgagcgggtcagc
tataccttccgcgacaatctggcgggcacggcctttgcgggccatgccagcgacacggcg
ggcacctatcgcggcacgctgcgctatgatttcagcccgacgatcaacggcttcgtgacc
tatgctacgggctataagggccagacctacgacctgacgaccggcttcaaccgcaaccgc
gcgctggccgggccgatccgccccgaacggtcgggcgacaaggagctgggcatccgcagc
cagttcctcgaccggcgcctgaccgccaacgtcacgctgttcgacaccagttaccgcgac
cttcaggcccagacgatcgagacgctggccgacggcacgtccaactatcgcctgaccaac
gtcggcaagctcaacaccaagggcgtcgagttcgaaggatcgatgcggttcagcgacagc
ttcaacctcggcggggccgtcacctatctcgacgcgaaatataccgagttcgcccgcgcg
caatgctatccgttgcagacggcggcccagggctgcaccggctcgcccgccagccagaac
ctgaccgacaccaccgcgatccaggcgcccaagtggaagttcaacgccaatctggattac
tcgccgcgcctgaccgcgacgacgcgcggtgtcgcgcaggtgaactggcaatatcagagc
agcctgtatttccaggcgcgcgatccgcagacctttcagcccgccttcagcatcgtcaat
gtcggtctgggcgtgcgcgaggaggatcgccgctgggaactggtcgccttcgtcaacaac
ctgttcgacaagcaatattatgggtcgctggtaaacacggcgggcaatttcggcaacaat
atcgcgacccaggcggtgctgccgcgtgacttccgccgctatgcgggtatgcgcctcggc
ctgaacttctga
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