Sphingomonas sp. LK11: AV944_10220
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Entry
AV944_10220 CDS
T04954
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
splk03000
]
AV944_10220
Transcription factors [BR:
splk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV944_10220
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
APX66143
LinkDB
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Position
complement(2227950..2229053)
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AA seq
367 aa
AA seq
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MRHGGLTSPMPPRRRQSVTIRHVAADAGVSLQTVSRVINKEPNVRPEMMERVQASIARLG
YVPSIAAQRMGGSRSYLIVALNDRERTIADWRNRQGTDWVDQMMLGGMLTCAEHGYRLIV
ELIDTHSDHIERELLAAIAALQPDGVILTPPHSENPLITDLLEAQGISFARIGSLKPGTG
FALSLDDEGAARQATDHLIGLGHRRIGFIAGPDEYELSGWRVAGWRASMAAAGLACESLL
AQGDFSFASGRAAASALFDGDVAPSAIIASNDQMALATLELARERGFSVPRDLSLVSFDD
TPIVRFVHPPLTAMVQPIAAVTARAVELIIAEQAGQDIPSVPVVTPAQLAIRASTAPPRE
DKRTDMR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcacggcggcctgacctcgcctatgccgccgcgccgccgccagtccgtcaccatc
cgtcatgtcgccgccgatgcgggcgtctcgctccagaccgtcagccgggtcatcaacaag
gaacccaatgtccgccccgagatgatggagcgggtccaggcgtcgatcgccaggctgggc
tatgtcccctcgatcgcggcgcagcgcatggggggatcgcgatcctatctgatcgtcgcg
ctcaacgaccgggaacgcaccatcgccgactggcgcaaccggcagggcaccgactgggtc
gaccagatgatgctggggggcatgctgacctgcgctgagcatggctatcgcctgatcgtc
gagctgatagatacgcatagcgaccatatcgagcgcgagctgctggccgcgatcgccgcg
cttcaacccgatggcgtgatcctgaccccgccgcattccgagaacccgttgatcaccgac
ttgctggaggcacaggggatcagctttgcacgtatcggatcgctcaagcccggcactggc
tttgccctgtcgctggacgatgagggcgcggcacgacaggcgaccgatcatctgatcggg
ctgggccatcgccggatcggcttcatcgccgggccggacgagtatgaactcagcggctgg
cgggttgcgggatggcgtgccagcatggcggcggcggggctggcttgcgagagtctgttg
gcgcagggcgatttcagcttcgcctcggggcgcgccgccgcctcggcactgttcgacggc
gatgttgccccgagcgcgatcatcgccagcaacgaccagatggcgctggccacgctggaa
ctggcccgcgaacgggggtttagcgtaccgcgcgacctgtcgctggtcagtttcgacgac
acgccgatcgtccgcttcgtccatcccccgctgaccgccatggtccaaccgatcgccgcc
gtcactgcccgcgcggtcgaacttatcatcgccgagcaggccgggcaggacataccgagc
gtgccggtcgtcacccctgcccaactcgccatccgcgcctccaccgctccgccaagggag
gacaagcgcaccgacatgcgatag
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