Sphingomonas sp. LK11: AV944_10300
Help
Entry
AV944_10300 CDS
T04954
Name
(GenBank) TonB-dependent receptor
Organism
splk
Sphingomonas sp. LK11
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APX66155
LinkDB
All DBs
Position
complement(2251417..2254563)
Genome browser
AA seq
1048 aa
AA seq
DB search
MKSVPTIRLSRIALLCATAVGAMSASTAWAQAVPAPQGQILNDGQDDGPSVPPAPQTDQT
QGTPSEDIVVTGYRSSLAKSTNAKRASTGFTDSIFAEDIGKFPDTNIAESFNRIPGVTIT
RDVTGEGTNVAIRGLGSNFTNVTLNGAPIAVASSGSTDAQGTDRSVDLSFFPTDLFTKLT
VNKSYTADLLEGGAAGNIDLRSARPFDRSGPFLAYNIQGSKQTPEDRIGARGSLIGSWRN
DTFGVLAGVSAQRLFTDTRGFETIGYTNPALTAAQCGATSGCNSTGGGNWTIPATVPVGA
GAGLVPGTVIDRNFLLANNPGATIQQIDNGLLPRLGRVTSIRGPRDRINAILSAEYRPTD
ELHFYVDGLYGFKKNELTRENMAWIVRNGAIIPTNLTFDKSDCSAGCTVTGGTFANAQFF
NEFRPYTETTRLWSVNPGAEWQINDKLKLNFQGNYARSTFHRESPTVGMTTPLGVGNTVT
FSNTGGIPTIKSALDLNDPKNFGWYAGSRVNLQDERRLNINKGLRGDLTWGDTALNLKVG
GAYDDTSRRIRGFDNSQFWQNAVCGNNPNVAVPSPNSQPPCEGLNAPGAAPAGYPTYPGY
GTGFSSGMSGPVSYGGSLIPNSAAPSYLSPGPAGFVTVNWPAFAKASNYQFFHDNAPENG
GANTGASAGFIREVVKSAFATVNGAQELGGNTLRFNVGLRYVNTIQTISGRVSVPDPRNT
TATGASLPDGSRYPSIVNIADTRNVYSEWLPAATFAYDIGDHAVVRVAGSRTMTRPDPSA
QLPGINFGAPSADQASIGNPALAPYLSTNLDLGFEYYTGREGVISFNAFRKSLEGFTTTA
ISTVPFSNLAQYGITYDTLNPTQQIAINARGGPSQAQVQVTSQVNVPNKLTINGLEFQWV
QPLDFLTRAIGITGFGFNANATIVDQRSDGPAVAFGVAPFTYNITGYYEKNGVMLRVATT
SRQGAQNSGAAQNGIPNAALFGTDFTTYDFSSAFDLDKIFGIAGAPQLTVNVANFTNATL
RSYFQFENATFTQYKPGRQFLIGLRGTF
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgtgcccaccatccgcctcagccgcatcgccctgctatgcgccacggccgtc
ggcgcgatgagcgcatcgaccgcctgggcgcaggcggttccggccccgcaagggcagata
ctcaatgacggccaggatgacggcccctccgtgccgcccgcgccgcagaccgaccagacc
cagggcacgccatccgaggacatcgtcgtcaccggctaccgctcgagcctggccaagtcg
accaacgccaagcgcgcgtcgaccggcttcaccgactcgatcttcgccgaggatatcggc
aagttccccgacaccaacatcgccgagtccttcaaccgcattccgggcgtcaccatcacc
cgtgacgtgaccggcgaaggcaccaacgtcgccattcgcggcttgggatcgaacttcacc
aacgtgaccttgaacggcgctcccatcgcggtcgcgtcatcgggttcgaccgacgcgcag
ggcactgaccgctcggtcgacctcagcttcttcccgaccgacctgttcaccaagctgacc
gtgaacaagagctacaccgccgacctgctggaaggtggcgcggcgggcaatatcgacctg
cgctcggcccgtccgttcgaccgcagcggccccttcctcgcctataatatccagggatcg
aagcagacgcccgaggaccgtatcggtgcgcgcggctcgttgatcggcagctggcgcaac
gacacgttcggcgtcctggcgggcgtttcggcgcagcgcctgttcaccgatacgcgcggt
ttcgagaccatcggctataccaacccggcgctgacggcggcgcagtgcggcgcgaccagc
ggctgcaacagcaccggcggcggcaactggacgatcccggcgacggtgccggtcggtgcc
ggtgcgggcctcgtccccggcacggtgatcgaccgcaacttcctgctcgccaacaatccg
ggtgcgaccatccagcagatcgataacggcctgctgccccgcctgggccgcgtcaccagc
attcgcggcccgcgcgaccgcatcaacgcgatcctgagtgcggagtatcgcccgaccgac
gagctgcatttctatgtcgacggtctgtacggctttaagaagaacgagctgacccgtgag
aacatggcctggatcgtccgtaacggcgcgatcatcccgacgaacctgaccttcgacaag
tccgattgcagcgcgggctgcaccgtcaccggcggcacgttcgccaacgcccagttcttc
aacgaattccgcccctataccgagacgacgcgcctctggagcgtcaatccgggtgccgag
tggcagatcaacgacaagctgaagctgaacttccagggcaattacgcccgctcgaccttc
caccgcgagagcccgaccgtcggcatgacgacgccgctgggcgtcggcaacaccgtcacc
ttctcgaacaccggcggcattccgacgatcaagagcgcgctcgacctgaacgacccgaag
aatttcggctggtatgcgggcagccgcgtcaacctgcaggacgaacgtcgcctcaacatc
aacaaggggctgcgcggcgacctgacctggggtgacaccgcgctgaacctgaaggtcggc
ggcgcctatgacgatacgtcgcgccgcatccggggcttcgacaacagccagttctggcag
aacgcggtctgcggcaacaatccgaacgtcgccgtcccctcgcccaactcgcagccgccg
tgcgagggtctgaacgcgccgggcgccgcgcctgcgggctatccgacctatccgggttat
ggcaccggcttcagctcgggcatgagcggcccggtcagctatggcggttcgctgatcccc
aacagcgcggcgcccagctatctgtcgcccggcccggccggtttcgtgacggtcaactgg
cccgccttcgccaaggccagcaactaccagttcttccacgacaacgcgcccgagaatggc
ggcgcgaacaccggcgccagtgcgggcttcatccgcgaggtcgtgaagtcggccttcgcg
accgtcaacggtgcgcaggaactgggcggcaacacgctgcgcttcaatgtcggcctgcgc
tacgtcaacacgatccagacgatctcgggccgcgtctcggtccccgatccccgcaacacg
accgcgaccggcgcgtcgctgcccgatggaagccgctatcccagcatcgtgaacatcgcc
gacactcggaacgtctattcggaatggctgcccgcggcgaccttcgcctatgacattggc
gaccatgcggtggtccgtgtcgcgggttcacgcaccatgacccgtccggacccgtcggcg
cagctgccgggcatcaacttcggcgcgccctcggccgatcaggcctcgatcggcaacccg
gcactggccccctatctgtcgaccaatctcgacctgggcttcgaatattataccggccgt
gagggcgtgatcagcttcaatgcgttccgcaagtcgctggaagggttcaccaccaccgcg
atcagcacggtgcccttctcgaacctggcgcagtacggcatcacctatgacacgctgaac
ccgacgcagcagatcgcgatcaacgcgcgcggcggacccagccaggcgcaggtgcaggtc
acgtcgcaggtcaacgtgcccaacaagctgaccatcaacggcctggaattccagtgggtt
cagccgctcgacttcctgacccgcgcgatcggcatcaccggcttcggcttcaacgccaac
gccaccatcgtcgaccagcgcagcgacggcccggccgttgcgttcggcgtggcgcccttc
acctacaacatcaccggctattacgagaaaaacggcgtgatgctgcgtgtcgccacgacc
tcgcgtcagggcgcgcagaatagcggcgcggcgcagaacggcatccccaacgcggcgctg
ttcggcaccgacttcacgacctacgacttctcgtcggcgttcgacctcgacaagatcttc
gggatcgccggtgcaccgcagctgaccgtcaacgtcgccaacttcaccaacgcgacgctg
cgctcctacttccagttcgaaaacgcgacgttcacccagtacaagccgggtcgtcagttc
ctgatcggcttgcgcggcaccttctaa
DBGET
integrated database retrieval system
