Sphingomonas sp. LK11: AV944_11225
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Entry
AV944_11225 CDS
T04954
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_11225
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AV944_11225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
RecA
AAA_22
AAA_30
AAA
DUF7125
AAA_5
Glyco_hydro2_C5
NTPase_1
NACHT
nSTAND3
AAA_29
AAA_14
Rad51
CbiA
SLFN-g3_helicase
DUF7129
ATPase_2
DUF7573
zf-RING_10
PAXNEB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
APX66308
LinkDB
All DBs
Position
2435552..2436925
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AA seq
457 aa
AA seq
DB search
MAKIQKRYVCQSCGSVSSRWQGQCPDCSEWNTMLEEAPVQLTPFAAKHNLQGGGRAIQLV
GLDADIPLPDRMATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKLAMAGKP
VAYVSGEEAADQVRLRARRLGLGQAPVRLAAATSVRDILTTLSIGTPPALLIIDSIQTMH
SDLIEGAPGTVSQVRASGQELIRFAKERGTAVVLVGHVTKDGSIAGPRVLEHMVDTVLAF
EGERSHQYRILRAIKNRFGGTDEIGVFAMQTEGLTEVGNPSSLFLTNREEGITGATVFPA
LEGTRPVLVEIQALTVRLASGATPRRAVVGWDTGRLAMILAVLEARCGLSFSSAEVYLNI
AGGYRVQDPAADLAVAAALISALSERPVPTDAIVFGEIALSGEIRSVAHGPLRLKEAGKL
GFEKAIVPRAMANDEGGLRMTSFRTLAEFVDHMLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatccagaagcgctatgtctgccaatcctgcggttcggtgtcctcccgttgg
caggggcaatgccccgattgctccgaatggaacacgatgctggaggaagcgccggtccag
ctgacaccctttgctgccaagcataacctgcaaggcggcggtagggcgatccaattggtc
ggactggacgccgatatcccgctgcccgaccggatggcgaccggcatcgccgaactcgac
cgcgcgctgggtggcggtttcgtcgagggttcggccacgctcatcggtggtgatccgggg
atcggcaagtcgaccctgctgctccaggcggcggcgaagctggcgatggcgggcaagccg
gtcgcctatgtctcgggcgaagaagccgccgatcaggtccggctgcgcgcacggcgactg
gggttggggcaggcccccgtacgactggcagcggcgacctcggttcgcgacatcctgacc
accctgtcgatcggaacgccgcctgcgctgcttatcatcgactcgatccagaccatgcac
tccgacctgatcgagggggcgccgggcaccgtcagccaggtgcgcgcgtcgggacaggag
ctgatccgctttgccaaggaacgcggcactgccgtcgtgctggtcggccatgtcaccaag
gacggctcgatcgcgggcccgcgcgtgctggagcatatggtcgacaccgtcctcgctttc
gagggcgagcgcagccaccagtatcgcatcctccgcgcgatcaagaaccgcttcggcggc
accgatgagatcggcgtcttcgccatgcagaccgaggggctgaccgaagtcggcaatccc
tcgtcgctgttcttgaccaatcgcgaggaaggaatcaccggcgccaccgtcttccctgca
ctggagggcacgcggccggtgctggtcgaaatccaggcgctgaccgtgcggctggcttcg
ggtgcgacgccacgacgcgccgttgtcggctgggataccggacgcctggccatgatcctg
gcggtgctggaggcgcggtgcgggctgagtttctcgtccgccgaagtctatctcaacatc
gcgggcggctaccgcgtgcaggacccggccgccgatctggcggtggcggcggcgctgatc
tcggccctgtccgaacggccggtgccgaccgacgccatcgtcttcggcgaaatcgcgctg
tcgggcgagatccgctccgtcgcgcatggcccgttgcgattgaaggaggcgggcaagctc
ggttttgaaaaggcgatcgtgccgcgcgccatggccaatgatgaaggcggcctgcgcatg
accagctttcgtaccctggccgagttcgttgaccatatgctggggcgcgggtag
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