Sphingomonas sp. LK11: AV944_11585
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Entry
AV944_11585 CDS
T04954
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
AV944_11585
Enzymes [BR:
splk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AV944_11585
Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AV944_11585
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
APX66367
LinkDB
All DBs
Position
2509666..2511675
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AA seq
669 aa
AA seq
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MMALTKAGALLATLAGSMITPGGQDQLDRYRTQMANMSPNQSTQGMPAPADGAIAAALAQ
WRALQQTDSLPFDSYAGFLMAHPGWPGEAGNRRAAEKQAANFTAAPSSIVAYFRRFPPQS
AAGGVAYARALLATGAPADAAQAARTAWRRGALSPNDEALVMSTFASALTPEDQDARMDA
LLWSGQTSAAARQLNYTSVARRPIFAARLAFRSKSADAASLSASTAEIYANDAGYVADRA
SWLRDTGDSLTARSWLARTRQLATRPGNVEKFYEALLVNARAAAADGQLQTAYDIARQVD
DAYPAGTDVSTKPYGERDDYTSLVWLAGQSAMKLARPADAMTLFDRYGRGSQSPQTRAKG
FYWAGRAAEAAGRSTEAAGFYGRAAQYRDQFYGQLALERTGRPLVAPPAIAATNVAPAVR
AAFDARETVRAAKFLGMIGQWQDQSAFIRQIAADAEDENDHLLAADLSRSINRPDLAVMV
GRSAMQNGLTDYSAAGFPTIPVPTGYEQSWTIIHAIARQESQFDRAAVSHAGARGLMQLM
PATAAEQSGKIGLSYSPAALTTDPNLSIQLGASYFERIRNNYGSYPLAIAAYNAGGSNVN
KWLRANGDPRTGTVDIVDWIEAIPYSETRNYVQRVLENAVVYDLMNPARATSRGPTPLSW
YLGKSSRPG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattgacgaaggcgggggcgctcctcgcgacattggctggatcgatgatcacg
ccgggcgggcaggaccagctcgatcggtatcgcacgcaaatggcgaatatgagccccaac
cagtcgacgcaggggatgcccgcccccgccgacggggcaatcgcagcggcgctggcccag
tggcgcgcgctgcaacagaccgattcgctgccgttcgacagctatgccgggttcctgatg
gcgcatcccggctggcccggcgaagcgggcaatcgccgcgcggccgaaaagcaggcggcg
aacttcaccgccgcaccgtcgagcatcgtcgcctatttccgtcgcttcccaccccagtcg
gcggcgggcggcgtggcctatgcccgtgccctgctggcgaccggcgcaccggcggacgcg
gcgcaggccgcgcgaacggcttggcggcgcggcgcgctgtcgccgaatgacgaagcgctg
gtcatgtcgaccttcgcctccgcactgacgccggaggaccaggatgcacggatggatgcg
ctgctctggtcggggcagacaagtgcggcggcgcgacagctgaattataccagcgtggcg
cggcgtccgatcttcgccgcgcggctggccttccgctcgaaatcggcggatgccgccagc
ctgtctgcgtcgacggcggaaatctatgccaatgatgcgggctatgtcgccgaccgcgcc
agttggttgcgcgacaccggtgatagcctgaccgcgcggtcctggctcgcccggacgcgg
caactcgcgacgcgacccggcaatgtcgaaaaattctacgaggcgttgctggtcaacgcg
cgggcggcagcggccgacggccagttgcagaccgcctatgacatcgcacggcaggtcgac
gacgcctatccggcgggcaccgacgtctcgaccaagccttatggcgagcgcgacgattat
acgagcctggtctggctggccgggcagagcgcgatgaagctggcacgccccgccgatgcg
atgacgctgttcgaccggtacggccggggcagccagtcgccgcagacccgcgccaagggc
ttctactgggcaggtcgcgcggccgaggcggcgggtcggtcgaccgaggcggcaggtttc
tacggccgggctgcgcagtatcgcgatcaattctatggtcagctcgcgctggagcggacc
ggccgcccgctcgtcgcgccgcctgcgatcgccgcgaccaatgtcgcgcctgccgtgcgc
gccgccttcgatgcgcgcgaaaccgtgcgcgccgccaagttcctgggcatgatcggccaa
tggcaggaccagagtgccttcattcgccagatcgcggccgatgcggaggacgagaacgac
catctcctcgccgccgatctctcgcggagcatcaatcgccccgatctggccgtcatggtc
gggcgcagcgcgatgcagaacgggctgaccgattattcggcggctggcttcccgaccatc
ccggtcccgaccggctatgagcagagctggacgatcatccatgccattgcgcggcaggaa
agccagttcgaccgtgccgccgtcagccatgcgggcgcgcgtggcctgatgcagctgatg
cccgccaccgccgccgagcagtcgggcaagatcggcctgtcctactcacccgccgcactg
accaccgatccgaacctgtcgatccagctgggcgccagttacttcgagagaatccgcaac
aattacggcagctatccgcttgcgatcgcggcctataatgcgggaggcagcaatgtgaac
aagtggttgcgcgccaatggcgatccgcgcaccggcactgtcgacatcgtggattggatc
gaggctatcccctattccgagacccgcaactatgtgcagcgggtgctggagaatgcggtg
gtctacgacctgatgaaccccgcccgcgcgaccagccgggggccgacgccgctcagctgg
tatctgggcaagtcgtcgcggccgggttga
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