Sphingomonas sp. LK11: AV944_11940
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Entry
AV944_11940 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_11940
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_11940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APX66424
LinkDB
All DBs
Position
complement(2588138..2591149)
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AA seq
1003 aa
AA seq
DB search
MVARTAFVAAFVSRRTLMAGVSPLMALAMVSPGTAFAQTSGAVRPDVPVQANTTTAQQAG
TPQDQSTAPSDADNSPSPAGEATTADIIVTGLRSSLQRNLDIKRTATGVVDAISAEDIGK
FPDSNVAASLQRLPGVSIQRSGARGEPTGITVRGFGGDFNTTLYDGRRISTATGGRQIDF
STVGSDFIGGISVLKTPDVSLASSSIGATVDIQFPKPFDHPGFRAAVSASGSLQDRAGHV
VPTLGALVSDTFADDTLGILSSFIYTRRDTDTNRVFVSGWPGGNFAPCQLQGSTATVCRP
TFDPNADPSQRRTLTGWFPQQYGAEQQRTQDERVDGRVALQWHPSNDLMVTLDNNFSRQT
ISTDVYGFGVWFSQDALRNVKQDANGTAVSFTQAGSPTDFTAAMNKQILQTNQTGLNVKW
DVTEKLTVEADGAYAKSWLNPGNTIGSSNGDIGYGGALGTNLGFNITADSNKAFPSISNF
GPAGNGGRWADPAVIGSHVTVLQTQKNTDELKQFRGVVTWKEDNITLKAGGQYTDDTFNL
LNRSTFTNNFWQAYAGYGAPSGQGSGVSPLPSSLYQGSISLNNFIPGFGGTLPPSVLVYS
PQAYQNYLTSLGNPQAQNVPGFNYNGGVNGFTGQFTEAVDPGSILSVNEKTLSLFFSGKM
EGQIGSMPLHAAFGVRTENTRLRSIGQGRAPTVITRSAADPTLLSIAFTDVQPISNRSSY
TYVLPSVDLRLEVTDTLQLRFDASRTLTRPGLSLLNPVVGIGNGQRVGALSGSGGNPNLK
PYLASNFDVAAEWYYQRNSYIAVDLFLKNVSNFIVGGVTNQTVGGVIDPTTGNPAVFAIT
AQVNGPDATVRGVEIAWQQVFGDSGFGFQANGTFVNTNKPYDPKIVGQSGFAVTGLANSA
NFVGFYDKNGFQFRTALNWRDEYLSGFGQNQNTGSYGAEPTFVNQSFQVDLTSSYDVTKN
FSIFGEALNINKNKQSTHGRFKNQLLDVFDYGRRFTLGARYRF
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggtggctcgcactgcttttgtggctgcattcgtttcgcgccggaccttgatggcgggc
gtctcgccgctcatggccctcgccatggtgtcgccggggacggcctttgcccagaccagc
ggcgcggtccgcccggacgtgccggtccaggccaacaccaccaccgcccagcaggccggt
accccgcaggaccagtccaccgctcccagcgacgccgataacagtccgtctcccgccggc
gaggcgaccaccgccgacatcatcgtgaccggcctgcgcagctccttgcagcgcaatctc
gacatcaagcgtaccgcgaccggcgtcgtcgacgcgatctcggccgaagatattggtaaa
ttccccgattcgaacgtcgcggcctcgctccagcgtctgccgggcgtctcgatccagcgg
tccggcgcccgtggcgagccgaccggcatcaccgttcgcggctttggcggcgacttcaac
acgacgctgtatgacggccgccgcatctcgaccgcgaccggcggtcgccagatcgacttc
agcaccgtcggctcggactttatcggcggcatcagcgtcctgaagacgccggacgtgtcg
ctggcgtccagctcgatcggcgcgaccgtcgacatccagttccccaagccgttcgaccac
cccggcttccgcgccgccgtcagcgcttccgggtcgctacaggaccgcgcgggccatgtc
gtgccgacgctcggcgcgctggtcagcgacacgttcgctgatgacacgctcggtatcctg
tcgagcttcatttatacccgccgtgataccgataccaaccgcgtcttcgtgtcgggctgg
ccgggcggcaacttcgcgccttgccagctgcaaggcagcaccgccaccgtctgcagacct
accttcgaccccaacgctgaccccagccaacgccgcaccctgaccggctggttcccgcag
caatatggcgccgaacagcagcggacccaggacgagcgcgtcgacggtcgcgtcgccctg
caatggcaccccagcaacgacctgatggtcacgctggacaacaacttttcccgtcagacc
atctcgacggacgtttacggcttcggcgtgtggttcagtcaggatgcgctgcgcaacgtc
aagcaggacgccaacggcacggcggtcagctttacccaggccggttctccgaccgacttc
accgcagcgatgaacaagcagatccttcagaccaaccagaccggtctgaacgtcaagtgg
gacgtcaccgagaagctgaccgtcgaggcggacggcgcctatgccaagagctggctgaac
cccggcaacaccatcggcagcagcaacggcgacatcggctatggcggcgcgctgggcacc
aatctgggcttcaacatcaccgccgacagcaacaaggcgttcccgtcgatcagcaacttc
ggtcccgccggtaacggtggccgttgggccgatccggcggtgatcgggtcgcacgtcacc
gttctgcaaacccagaagaacaccgacgaactgaagcaattccgcggcgtcgtgacctgg
aaagaggacaacatcaccctcaaggcgggtggccagtacaccgacgacaccttcaacctg
ctgaaccgcagtaccttcaccaacaatttctggcaggcttatgccggttatggtgcgccg
tcgggccagggctcgggcgtctcgccgctgccgtcgagcctgtatcagggatcgatcagc
ctcaacaacttcatcccgggctttggcggcacgctaccaccgtcggtcctggtttatagc
ccacaggcctatcagaactatctgaccagcttgggcaacccgcaggcgcagaacgtccct
ggcttcaactataatggtggcgtgaacggcttcaccggccagttcacggaagcggtcgat
ccgggcagcatcctgtctgtcaacgaaaagacactgtcgctgttcttcagcggcaagatg
gaaggtcagattggcagcatgccgctgcacgccgcctttggcgtgcggaccgagaacacc
cgcctccggtcgatcggccagggtcgtgcgcccacggtcatcacgcgcagtgccgccgat
ccgaccctgctgtcgatcgcctttaccgacgtccagccgatttcgaaccgcagcagctac
acctatgttctgccttcggtcgatctgcgactggaagtgaccgacaccctgcagcttcgc
ttcgacgcgtcgcgcacgctgacccgtccgggcctcagcctgctgaaccccgtcgtcggc
atcggcaacggccagcgtgtcggtgccctgtcgggcagcggtggcaacccgaacctgaag
ccctacctcgccagcaatttcgacgtggcggcggaatggtattaccagcgcaactcgtac
atcgcggttgatctcttcctgaagaacgtcagcaatttcatcgttggcggcgtaaccaac
cagacggtgggcggcgtgatcgatccgacgacgggcaaccctgcggtcttcgccatcacg
gcgcaggtcaacggtcccgacgcaacggtccgcggtgtcgaaatcgcgtggcagcaggtg
ttcggcgacagcggcttcggtttccaggccaacggcaccttcgtcaacaccaacaagccc
tatgacccgaagatcgtcgggcagagcggcttcgcggtgaccggcctggcgaactcggcg
aatttcgtcggcttctatgacaagaacggcttccagttccggaccgcgctgaactggcgt
gacgaatatctgtcgggctttggccagaaccagaataccgggtcgtacggtgccgagccg
accttcgtgaaccagagcttccaggtcgacctgaccagcagctacgacgtcacgaagaac
ttttcgatcttcggtgaagcgctcaacatcaacaagaacaagcagagcacgcatggccgg
ttcaagaaccagctgctcgacgtgttcgattatggccgccgcttcacgctcggcgcgcgc
tatcgcttctga
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