Sphingomonas sp. LK11: AV944_12335
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Entry
AV944_12335 CDS
T04954
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00550
Peptidoglycan biosynthesis
splk01100
Metabolic pathways
splk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AV944_12335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AV944_12335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
AV944_12335
Enzymes [BR:
splk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AV944_12335
Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AV944_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF3693
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
APX66486
LinkDB
All DBs
Position
2679861..2681927
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AA seq
688 aa
AA seq
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MDRPGRIMTEAAQAYSFSRRAFVLGTAQAGVGLMLAGRMAWLSIAQNEKYNLLSESNRVN
TTMIPPRRGWLIDRHGMPIANNRTDFRVDIIPDRLEDKDRVLELLRRILKLDDEAMNRIR
LDLEHAAGFQPVQVAERLDWERFAAVSVRLPELPGVQPTRGFARFYPAGPAVAHLTGYVG
TPTAEQFKATHDQLLVTPGFKLGKDGLEKMLEPYLRGKPGAKRVEVTARGKVVAELATRP
DTPGRNIRLTIDAGLQEYAARRLGTNSGSAVVLDCRTGETLAMVSMPAYDPNSFSDGISH
LEWSMLSENDHVPLMNKVTQGLYPPGSTVKPMNGLALLEAGVGANDRVLCTGAMRVGTGV
FHCHKRGGHGALNLKGAIEQSCDIYFYEMIRRMGYDRIAPVARMVGLGQKFDLPLSTQRY
GTVPDAAWKLKKYKTKWTVADGLNASIGQGYVLANPLQLAVMAARLASGRHLQPSMLAHQ
VHLDAPALPVASEHLAIVRDAMFGVVNQGGTGGAARMLVPGVSLAAKTGTAQVRRITMAE
RRMGVLKNGQLPFKLRDHALLVCFAPADNPRYAAAVVLEHNGHTVRNLDAPLIGRDIMTY
LFDRDRALASLAEGEPTWGGDIATRMRAEEAAYRAAHAPQPAAAATKTDAGAATDAPAVE
AATNVSDAQAEAMATRETDPEDAGDPNP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatcgccccggccggatcatgaccgaggccgcgcaggcctatagcttttcgcgtcgc
gccttcgtgctgggcacggcgcaggcgggcgtcggcctgatgctcgccgggcggatggcg
tggctgtcgatcgcgcagaacgagaaatacaaccttctctccgagagcaaccgcgtcaac
acgacgatgatcccgccgcgtcgcggctggctgatcgaccggcatggcatgcccatcgcc
aacaaccggaccgacttccgcgtcgacatcatccccgaccggctggaggacaaggaccgg
gtgctggaactgctccgccgaatcctgaagctggacgacgaggcgatgaaccgcatccgc
cttgacctggaacatgccgccgggttccagccggtgcaggtcgccgagcggctggactgg
gaacgcttcgcggcggtcagcgtccgcctgcccgaactgcccggcgtgcagccgacgcgc
ggctttgcccgcttctatccggctggccccgccgtcgcgcatctgaccggctatgtcggc
acgccgacggccgaacagttcaaggcgacgcatgaccagttgctcgtcacccccggtttc
aagctgggcaaggacgggctggaaaagatgctggagccgtatcttcgcggcaagcccggc
gccaagcgggtcgaggtcaccgcacgcggcaaggtggtggccgagctcgccacccgtccc
gacacgcccggccgcaatatccgcctgaccatcgatgcggggttgcaggaatatgccgcc
cgtcgcctgggcaccaattcggggtcggcggtggtgctcgactgccgcaccggcgagacg
ctggcgatggtgtcgatgcccgcctacgaccccaacagcttttccgacgggatcagccat
ctcgaatggtcgatgctgtcggaaaacgaccatgtgcccttgatgaacaaggtcacgcag
gggctgtatccgcctggctcgaccgtcaagccgatgaacggcctggcgttgttggaggcg
ggcgtcggggcgaacgaccgggtgctctgcactggcgcgatgcgggtcgggacgggcgtg
ttccactgccacaagcggggcgggcacggcgcgctgaacctgaagggcgcgatcgagcag
agctgcgacatctatttctatgagatgatccggcgcatgggttatgaccggatcgcaccg
gttgcgcggatggtcgggttgggccagaaattcgacctgccgctcagcacgcaacgttat
ggcaccgtgcccgatgcggcctggaagctgaagaaatacaagacgaaatggaccgtcgcc
gatggcctgaacgcctcgatcggtcagggctatgtgctggccaatccgttgcaactggcg
gtaatggcggcgcggcttgcgtccgggcggcatctccagcccagcatgctagcgcaccag
gttcatctcgacgcccctgcgctgcccgtcgcttccgagcatctggcgatcgtgcgcgac
gccatgttcggcgtggtcaaccagggcggcaccggcggcgcggcgcggatgctggtgccc
ggcgtcagcctggcggccaagaccggcaccgcgcaggtgcgccgcatcaccatggccgag
cggcgcatgggcgtgctgaagaacgggcagctgcccttcaagctacgcgatcacgcgctg
ctcgtctgcttcgcgcccgccgacaatccacgctacgccgccgccgtcgtgctggagcat
aacggccataccgtgcgcaatctggacgcgccgctgatcgggcgcgacatcatgacctat
ctgttcgaccgcgaccgggcattggcctcgctggcggaaggcgaaccgacctggggcggc
gacatcgccacccggatgcgcgccgaggaagccgcctaccgcgcggcgcatgcccctcag
cccgctgccgccgcgaccaagaccgatgcgggcgcggcgaccgacgcccccgccgtcgag
gccgcgaccaacgtctccgatgcccaggccgaggcgatggcgacgcgcgaaaccgatccc
gaagacgcaggcgaccccaatccatga
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