Sphingomonas sp. LK11: AV944_12735
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Entry
AV944_12735 CDS
T04954
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
splk03009
]
AV944_12735
Enzymes [BR:
splk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AV944_12735
Ribosome biogenesis [BR:
splk03009
]
Prokaryotic type
ribosomal protein modification factors
AV944_12735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
APX67673
LinkDB
All DBs
Position
2762536..2763876
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AA seq
446 aa
AA seq
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MATKLPTPPRVGMVSLGCPKNLVDSERILTQLRADGYQMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIKENGRVIVTGCMGKEAEAIRTRFPDVLAITGAHEYEQVVEAVHAAAPA
NLSPYIDLIPDAGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LVAAGTRELLVISQDTSAYGIDIRKQPRMWKGQEVVPHMTDLARELGKIAPWVRLHYVYP
YPHVDQVIPLMAEGLVLPYLDIPFQHAAPSVLKRMKRPGNDAKVLQRIHQWRDICPDIAI
RSTFVVGFPGETEEDFEYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDHVPEAVKEERY
ARIMEKTAAISAAKLAAKVGRTLPVIIDAVDEEGGATGRSQADAPEIDGEVFLRDAGHLA
VGDIVKVEIEDADEHDLYGVPVTGNA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaactccctactccgccgcgtgtcggcatggtctcgctcggctgtcccaag
aatctggtcgacagcgaacgcatcctgacccagctgcgcgccgacggctatcagatgtcg
cccgactatgccggggccgatgtcgtgctggtcaacacctgcggctttctcgactccgcc
aaggaggagagcctggaggcgatcggcgaggcgatcaaggagaacggccgcgtcatcgtg
accggctgcatgggcaaggaagccgaggcgatccgcacccgcttcccggacgtgctcgcg
atcaccggcgcgcatgaatatgaacaggtggtcgaggccgtgcacgccgccgcgccggcg
aacctgtctccctatatcgacctgattcccgatgcgggcctgaagctgaccccgcgtcat
tacagctatctgaagatttcggagggctgcaaccaccggtgcagcttctgcatcatcccc
agcttgcgcggcgatctggtcagccgccgccccgacgcgatcctgcgcgaggcggaaaag
ctggtcgcggcgggcacacgcgagctgctggtcatcagccaggacacctcggcctacggc
atcgacatccgcaagcaaccccggatgtggaaggggcaggaggtcgtgccgcacatgacc
gacctcgcccgcgaactgggcaagatcgcgccctgggttcggctgcactatgtctatccc
tatccgcatgtggatcaggtgatcccgctgatggcggaaggcctggtgctgccctatctg
gacattccgttccagcatgccgcgccctctgtgctcaagcggatgaagcgccccggcaac
gacgccaaggtgctgcagcgcatccaccagtggcgcgacatctgccccgacatcgccatc
cgctcgaccttcgtcgtcggcttccccggcgagacggaggaggatttcgaatatttgctc
gactggctggatgaagcccagctcgaccgcgtcggcgccttccgcttcgagccggtcgag
ggtgccgccgccaatgccctgcccgatcacgtccccgaggcggtgaaggaagagcgttac
gcgcgaatcatggaaaagaccgccgccatctcagccgccaagctcgccgccaaggtcggc
cgcactctgcccgtcatcatcgacgcggtggacgaggaaggcggcgccaccggccggtcc
caggccgacgcgcccgagatcgacggcgaagtcttcctgcgcgacgccgggcatctggcg
gtcggcgatatcgtgaaggtcgagatcgaggatgccgacgagcacgacctttacggcgtt
cccgtcacaggaaacgcataa
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