Sphingomonas sp. LK11: AV944_13490 Help Entry AV944_13490       CDS       T04954                                  Name (GenBank) RNA polymerase subunit sigma   KO K03086   RNA polymerase primary sigma factor Organism splk  Sphingomonas sp. LK11 Pathway splk02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:splk00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AV944_13490  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:splk03021]     AV944_13490 Transcription machinery [BR:splk03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AV944_13490 SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_ner Sigma70_r3 Sigma70_r2 Sigma70_r1_1 Sigma70_r4 Sigma70_r1_2 Motif Other DBs NCBI-ProteinID:  APX66670 LinkDB All DBs Position 2945462..2947489 Genome browser AA seq 675 aa AA seqDB search MAKANMAADTTDTTETGDAPLIDLNEASIKKLIARAKKRGYITYDQLNEALPQDQMSSDQ LEDIMAALNEMGVNIVENEEQGEDGESEEEADDAETTDAESDGGPQPEAKKKETVDRTDD PVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMILGLCESPITFNAIIDWSTALNEGTM QLREILDLDAMLSKDAGPENLGEEDEDDNGEISAKNAGPQFKEEEEPEEPSVDDEDGEGG ERRGPRAEDEEEDNTLSLAQMEETLKPQALEKFANITAIYKKFSKIQQQRLESMALGGEL SSAEERKYHKLREELTAEVESVQFHNAKIEFLVDQLYAYNRRLTALGGQMLRLAERHKVN RKDFLDRYLGHELDENWLDTVRGVDKKWGNFATNEAATVDRIRSEIADISQQTGMALTEF RRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEQGREP TPEEMAERLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPVDAAIQA NLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKL KHPSRSRKMRSFLDQ NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggcgaaggcgaatatggcggcggatacgaccgataccacggaaacgggcgatgcgccg ctgatcgacctgaacgaggcgtcgatcaagaagctgatcgcgcgcgccaagaagcgcggc tacatcacgtacgaccagctgaacgaagcgctgccgcaggaccagatgtcctccgatcag ctcgaggatatcatggccgccctgaacgagatgggcgtcaatatcgtcgagaatgaggaa cagggcgaggacggcgagtccgaggaagaggccgacgacgccgagaccacggacgccgaa tccgatggcggcccgcagcccgaggcgaagaagaaggaaaccgtcgatcgcaccgacgat ccggtccgcatgtacctgcgcgagatgggcgcggtcgaactgctgagccgcgagggcgag atcgccatcgccaagcggatcgaggcgggtcgcgacacgatgatcctggggctgtgcgaa agcccgatcaccttcaacgcgatcatcgactggtcgaccgcgctgaacgaaggcacgatg cagctgcgcgagatcctcgacctcgacgccatgctgtccaaggacgccggcccggaaaat ctgggcgaggaggacgaggacgacaatggcgagatcagcgccaagaacgccggtccccag ttcaaggaagaagaagagcccgaggaaccctcggtcgatgacgaggatggcgagggcggc gaacgtcgcgggccccgcgccgaggacgaggaagaggacaacaccctgtccctcgcgcag atggaggaaacgctcaagccgcaggcgctggagaagttcgccaacatcaccgcgatctac aagaaattctcgaagatccagcagcagcgcctggagtccatggcgctgggcggcgagctg tcgtcggcggaggagcgcaagtaccacaagctgcgcgaagaattgaccgccgaggtcgag agcgtccagttccacaacgccaagatcgaattcctggtcgaccagctctacgcctataac cgccgcctgaccgcgctgggcggccagatgctgcgtctggccgaacggcacaaggtcaac cgcaaggatttcctcgaccgctatctgggtcacgagctggacgagaattggctcgatacc gtgcgcggcgtcgacaagaagtggggcaacttcgccaccaacgaagccgccaccgtcgac cgcatccgcagcgagatcgccgacatttcgcagcagaccggcatggcgctgaccgaattc cgccgcatcgtgaacatggtgcagaagggcgagcgcgaggcgcgtatcgccaagaaggaa atggtcgaggccaatctgcgcctcgtcatctccatcgccaagaaatacaccaatcgcggc ctgcaattcctggaccttatccaggagggcaatatcggcctgatgaaggcggtcgataag ttcgaatatcgccgtggttacaaattctcgacctatgcgacctggtggatccgtcaggcg atcacccgctcgatcgccgaccaggcgcggaccatccgtatcccggtccatatgatcgag acgatcaacaagctggtccgtaccagccgccagttcctgcacgagcagggccgcgagccg accccggaagagatggccgagcgcctctccatgccgctggagaaggtgcgcaaggtgatg aagatcgccaaggagccgatcagccttgaaacgccgatcggcgacgaggaggattcgcac ctcggcgacttcatcgaggacaagaacgcggtcatcccggtggacgcggcgatccaggcg aacctcaaggaaacggtcacccgcgtcctcgcctcgctgaccccgcgcgaagagcgcgtg ctgcgcatgcgcttcggcatcggcatgaacaccgatcacacgctggaagaggtcggccag cagttctcggtcacgcgcgaacgcattcgccagatcgaggcgaaggcgctccgcaagctg aagcatcccagccgcagccgcaagatgcgcagcttcctcgaccagtaa

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