KEGG   Sphingomonas sp. LK11: AV944_13700
Entry
AV944_13700       CDS       T04954                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03089  RNA polymerase sigma-32 factor
Organism
splk  Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:splk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:splk03021]
    AV944_13700
Transcription machinery [BR:splk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AV944_13700
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: APX66705
LinkDB
Position
2980802..2981707
AA seq 301 aa
MAKGSNVPATIPALGGEQSLNRYLAEIKKFPILAPEQEYMLAKRFQEHGDPEAAAQLVTS
HLRLVAKIAMGYRGYGLPTSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFEDGDLRPEDVTKIATDLGVNEDEVISM
NRRMAMGGDTSLNVSMREDGEGQWQDWLADDAPLQDSVVAEQQEADVRHDMLVSAMDDLN
DREKHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGEKRLLAA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaaaaggcagcaacgtcccggcgacgattcctgcactgggcggggagcagtcgctc
aaccgctatctcgccgagatcaagaaattcccgatccttgccccggagcaggaatatatg
ctcgccaagcgctttcaggagcatggcgaccccgaggcggcggcccagctcgtcacctcg
cacctgcgtctcgtggcgaagatcgcgatgggttatcgcggctatggcctgcccacctcc
gaactgatctcggagggcaatatcggcctgatgcagggcgtgaagaagttcgagccggat
cgcggcttccgcctggcaacctatgcgatgtggtggatccgcgcctcgatccaggaatat
atcctgcgctcgtggagcctggtgaagatgggcaccaccgcggcccagaagaagctgttc
ttcaacctgcgccggatgaagtcgaagctcgacgcgttcgaggacggcgacctgcggccc
gaggacgtgaccaagatcgccaccgatctgggcgtcaacgaggacgaggtcatcagcatg
aaccgccgcatggcgatggggggcgacacgtcgctcaacgtctcgatgcgcgaggatggc
gagggccagtggcaggactggctggccgacgatgcgccgctccaagactcggtcgtcgcc
gagcagcaggaggcggatgtccgccatgatatgctggtcagcgcgatggacgatctgaac
gatcgcgagaagcacatcctgaccgagcgtcgcctgaccgacgatcccaagacgctggaa
gagctgagccaggtttacggtgtcagccgcgaacgcgtccgccagatcgaggtgcgcgcg
ttcgagaagctgcaaaaggcgatgatgcgcattgccggtgaaaagcggctgctggcggcc
gcctga

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