Sphingomonas sp. LK11: AV944_16085
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Entry
AV944_16085 CDS
T04954
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV944_16085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_16085
Enzymes [BR:
splk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AV944_16085
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV944_16085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
APX67100
LinkDB
All DBs
Position
3478923..3479552
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AA seq
209 aa
AA seq
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MGLSAEQIRESMDALAAAEPAIAAALTRIGYPAPRIRARGYATLVRTILGQQVSVASADA
HWRRLNELLGDASDPTRLHGVTDKELRGAGISRQKAGYLRSLGEEVTSGRLNLSALPEDD
EEAIAKLVAVKGIGRWSAEVYLLFAEGRTDIWPAGDLAVQIEMGRILGHDARPSEKLVRE
LAEAFRPHRSALAIFTWHHYGAGADAAPV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgagcgccgaacagattcgcgaaagcatggatgcgctcgccgccgccgagccc
gccatcgccgccgcgctgacccggatcggctaccccgcgccgcgcatccgggcgcgcggt
tacgccacattggtccgcaccatattggggcagcaggtgtcggtcgcctcggccgatgcg
cattggcggcgactgaacgagctgctcggcgatgcgagcgatccgacgcggcttcacggc
gtcaccgacaaggaactgcgcggcgctggcatatcgcggcaaaaggcaggctatctccgc
agcctgggcgaggaggtgacgagcggtcggctgaacctgtccgccctgcccgaggatgac
gaggaagcgatcgccaagctggtcgcggtcaagggcatcggtcgctggtcggcggaggtc
tatctgctgttcgcggaggggcgcaccgatatctggcccgcaggcgacctggccgtgcag
atcgagatgggccgcatcctgggccatgacgcacgaccgtccgaaaagctggtccgcgaa
ctggcggaggcctttcgcccgcaccgcagcgcgctcgcgatcttcacctggcaccattac
ggcgccggagccgacgccgcgccggtgtga
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