Sphingomonas sp. LK11: AV944_16865
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Entry
AV944_16865 CDS
T04954
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03030
DNA replication
splk03430
Mismatch repair
splk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV944_16865
03430 Mismatch repair
AV944_16865
03440 Homologous recombination
AV944_16865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splk03032
]
AV944_16865
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_16865
Enzymes [BR:
splk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV944_16865
DNA replication proteins [BR:
splk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV944_16865
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV944_16865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
APX67229
LinkDB
All DBs
Position
3648795..3649358
Genome browser
AA seq
187 aa
AA seq
DB search
MISPDFVVIDVETACSRTSSICQIGIVGYAAGVEVLAYETLVDPCDEFSAFNINIHGITA
DHVLGKPTFAALHPELAGHLAGRVTVAHSGFDKGALGRACERDALPPIAARWLDSVTIAR
RAWPELPNHKLNTLAAFLELEHRHHDALSDARAAGQVVLRAMAATGMTLADWFLPPPSAR
SRRQVRR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccccgatttcgtggtcatcgacgtcgaaaccgcctgttcgcggaccagcagc
atctgtcagatcggcatcgtcggctatgccgcgggcgtcgaagtgctggcctatgagacg
ctggtcgatccgtgcgacgaattcagcgcgttcaacatcaatatccacggcatcaccgcc
gatcatgtgctgggcaagccgaccttcgccgcgctgcatcccgaactggccgggcatctg
gcgggacgggtgacggtggcgcattcgggcttcgacaagggcgcgctgggccgcgcctgc
gagcgcgacgccctgcccccgatcgcggcgcgctggctggacagcgtgaccatcgcccgg
cgggcctggccggaattgcccaatcacaagctcaatacgctggcggccttcctggaactg
gagcaccggcatcacgatgcgctcagcgatgcgcgcgcggcggggcaggtggtgctgcgc
gcgatggccgcgacgggcatgactctggccgactggttcctcccgccgccgtccgcgcgc
tctcggcggcaggtccggcgctga
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