Sphingomonas sp. LK11: AV944_17265
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Entry
AV944_17265 CDS
T04954
Name
(GenBank) glycogen debranching enzyme
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00500
Starch and sucrose metabolism
splk01100
Metabolic pathways
Module
splk_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AV944_17265
Enzymes [BR:
splk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
AV944_17265
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Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
APX67295
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Position
3742915..3744714
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AA seq
599 aa
AA seq
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MTNQLALPLGATPVPGGTRFAVRSTAERVELCLFDGADERRLAMTRDGDVWTTTAPGTNH
LYGYRAHGEYDPGRNLWFDPAKLLVDPYALELDRPFIQSPRLAAYGEDTADIVPRARVVT
PLTDTPARPLFRPGGLIYELNVRGFTMRHPAIPPEQRGTLAALAHPAVLDHLRKLGVAAV
ELMPITAAIDERHLPPLGLRNAWGYNPVVPMALCPERVPGGVAELVSTAAVLRQAGIGVI
LDLVFNHMGESDIHGGTLSFRGLDPDAYARTTDGTLINDAGTGNTLDASRPGVRAMILDS
LRHFARAGVDGFRFDLAPVLARGSGFDARAPIFTEIAADPILSTRIMIAEPWDIGPGGYQ
LGNFPDHWLEWNDKYRDQVRRFWRGDGRAGDLATRIAGSADVFASAASRSVNFVAAHDGF
TLADLAAYAQRHNHANGEDNRDGHGDEVSWNHGQEGATDDPAIRGARTRSVRAMLATLFL
SRGTPMLTAGDEFGRSQNGNNNGYAQDNEATWLDWEDRDEALEDFVAQLSAFRRDMPLDW
TDWLAGGEWRNLSGGPMMPEDWDKGEGFALHLPIGDEKLILRFDHRHGVSAIRGRVLES
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcagctcgccttaccccttggtgccacccccgtccccggcggcacccgcttc
gccgtgcgctcgaccgccgagcgggtggagctatgtctgttcgacggcgcagacgaacgc
cgtctcgccatgacccgcgacggcgatgtgtggaccactacggccccgggcacgaaccat
ctctatggctaccgcgcgcacggggaatacgacccgggccgcaacctgtggttcgacccg
gccaagctgctggtcgatccttacgcgctagaactcgaccgccccttcatccagtcgccg
cgtctggcggcctatggcgaagacaccgccgacatcgtcccccgcgcccgtgtcgtcaca
ccgctgaccgacacccccgctcggccgctgttccggccgggcgggctgatctacgaactc
aatgtgcgtggtttcaccatgcgccatcccgccatcccgcccgaacagcgcggcaccttg
gcggcgctcgcccatcccgccgtgctggaccatctgcgcaagctgggcgtcgcggcggtg
gagctcatgccgatcaccgctgcgatagacgagcgccatctgccgccgctcggcctgcgc
aacgcctggggttacaacccggtggtgccgatggcgctgtgcccggaacgggtgccgggc
ggcgtcgccgaactggtctcgactgccgcggtgctgcggcaggccgggatcggcgtcatc
ctcgacctcgtgttcaaccatatgggcgagagcgacatccacggcggcaccctgtccttt
cgcgggctggacccggatgcctatgcgcggacgacggacggcacgctcatcaacgatgca
ggcaccggcaatacgctcgacgccagccgccccggcgtccgcgcgatgatcctcgacagc
ctgcgccatttcgcgcgggcgggcgtggacggcttccgcttcgacctggcgccggtactg
gcgcgcggatcgggcttcgacgcccgcgcgcccatcttcaccgagatcgccgccgatccg
atcctgtcgacccgcatcatgatcgccgaaccctgggatatcggccccggcggctatcag
ctcgggaatttcccggatcactggctggagtggaacgacaaatatcgcgatcaggtccgc
cgcttctggcgcggcgacggtagggcgggcgatctggcgacgcgaatcgcaggctcggcg
gatgtgttcgccagcgccgccagccgctcggtcaatttcgtcgcggcgcatgacggcttc
accctcgccgatctggccgcctatgcccagcgccacaaccacgccaatggcgaggacaat
cgcgacgggcatggcgacgaggtgtcgtggaaccatgggcaggaaggggcgacagatgat
cccgccattcgcggcgcccgcacccgctcggtacgcgcgatgctcgccacattgttcctg
tcgcgcggcaccccgatgctgaccgcaggcgacgagttcggccgcagccagaacggcaac
aacaacggctatgcccaggataacgaggcgacctggctcgactgggaggatcgcgacgag
gcgctggaggatttcgttgcacagctcagcgcctttcgccgggacatgcctctggattgg
accgactggctagccgggggcgagtggcgcaatctatccggtggcccaatgatgccggag
gattgggacaagggcgaaggctttgcgcttcatctgccaatcggcgacgaaaagctgatc
ctgcgcttcgatcacaggcacggagtctccgcgatcagggggcgagtgctggaaagctaa
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