Sphingomonas sp. LK11: AV944_17355
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Entry
AV944_17355 CDS
T04954
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00020
Citrate cycle (TCA cycle)
splk00190
Oxidative phosphorylation
splk00650
Butanoate metabolism
splk00720
Other carbon fixation pathways
splk01100
Metabolic pathways
splk01110
Biosynthesis of secondary metabolites
splk01120
Microbial metabolism in diverse environments
splk01200
Carbon metabolism
Module
splk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
splk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
splk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AV944_17355
00650 Butanoate metabolism
AV944_17355
09102 Energy metabolism
00190 Oxidative phosphorylation
AV944_17355
00720 Other carbon fixation pathways
AV944_17355
Enzymes [BR:
splk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AV944_17355
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Thi4
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
APX67309
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Position
3762995..3764803
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AA seq
602 aa
AA seq
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MSAAAYKIIDHTYDAVVVGAGGSGLRATMGIAEAGLKTACITKVFPTRSHTVAAQGGIAA
SLGNMGPDHWTWHMYDTVKGSDWLGDQDAIEYLCREAPAAVYELEHAGVPFSRTEEGKIY
QRPFGGMMQNMGEGPPAQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFALDLIMDDQ
GNCRGVIALCMEDGSIHRFRAHNVVLATGGYGRCYFSATSAHTCTGDGGGMVLRAGLPLQ
DMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMA
MEIREGRGVGKEGDHIYLHLDHIDPKVLAERLPGITETGKIFAGVDLTRQPLPVTPTVHY
NMGGIPTNYHGEVVRLKDGNPDSVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRAT
GLRIKDTLKPGTPHAPLPAGSEELALGRLDHFRNAAGSSTTASVRSEMQKTMQRHCAVFR
TDELLTEGRQMIRATYDRMKDIGIKDRSLIWNTDLVETLELDNLISQAVVTMESALNRKE
SRGAHVNEDFPDRDDANWMKHTVATFDGWGGQGGGVEIDYRPVHDYTLTDDIEYIKPKKR
VY
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgccgcctacaagatcatcgaccatacctatgacgccgtcgtcgtgggtgcg
ggcggctcgggcctgcgcgcgaccatgggtatcgccgaggccggtctgaagaccgcctgc
atcaccaaggtgttcccgacgcgcagccacaccgtcgccgcccagggcggcattgccgcg
tcgctcggcaatatgggtccggaccactggacctggcacatgtacgacaccgtcaagggg
tcggactggctgggcgaccaggacgcgatcgaatatctgtgccgcgaggcgcctgccgcc
gtgtacgagctggagcacgcgggcgtgccgttcagccgcaccgaagagggcaagatctat
cagcgcccgttcggcggcatgatgcagaatatgggcgagggtccgcctgcgcagcgcacc
tgcgccgccgccgaccgtaccggtcacgccatgctgcacgcgctgtaccagcagtcgctg
aagtatgacgcggacttcttcatcgagtatttcgcgctcgacctgatcatggacgatcag
ggcaattgccgcggcgtgatcgcgctgtgcatggaagacggctcgatccaccggttccgc
gcgcataacgtcgtgctggcgaccggcggttatggccgctgctatttctccgccacctcg
gcgcacacctgcacgggtgacggcggcggcatggtgctgcgtgcgggcctgccgctccag
gacatggagttcgtccagttccacccgaccggcatctatggtgccggcgtcctcatcacc
gagggcgcgcgcggtgaaggcggctacctgaccaactccgagggcgagcgcttcatggag
cgttacgcgccgtcggccaaggatctcgccagccgcgacgtcgtgtcgcgttcgatggcg
atggaaatccgcgaagggcgcggcgtcggcaaggagggggatcatatctacctccatctc
gaccatatcgaccccaaggtcctggccgaacgcctgcccggcatcaccgagaccggcaag
atcttcgccggtgtcgatctgacccgccagccgctgcccgtcacgccgaccgtccattat
aatatgggcggcattccgaccaattatcacggtgaggtcgtccgcctgaaggacggcaac
ccggactcggtcgtccccggcctgttcgcggtcggcgaagcggcctgcgtgtcggtgcac
ggcgcgaaccgcctgggctccaactcgctgatcgacctcgtggtgttcggccgtgcgacc
ggcctgcgcatcaaggacacgctgaagcccggcacgccgcatgcgccgctgcccgccggg
tcggaagagctggcgctgggccgcctggatcacttccgcaacgccgctggcagctcgacc
accgcctcggtgcgcagcgagatgcagaagacgatgcagcgccactgcgccgtgttccgc
accgacgagctgctgaccgaaggccgccagatgatccgcgccacctatgaccggatgaag
gacatcggcatcaaggatcgttcgctgatctggaacaccgatctggtcgagacgctggag
ctggacaatctgatcagccaggcggtcgtgacgatggaatcggcgctgaaccgcaaggaa
agccgcggcgcgcatgtgaacgaggacttccccgatcgcgacgatgccaactggatgaag
cacaccgtcgcgaccttcgacggctggggcggccagggcggcggggtcgagatcgactat
cgcccggtgcatgattacacgctgaccgacgatatcgagtatatcaagccgaagaagcgg
gtgtactaa
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