Sphingomonas sp. LK11: AV944_17405
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Entry
AV944_17405 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_17405
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_17405
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APX67318
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All DBs
Position
complement(3776631..3779018)
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AA seq
795 aa
AA seq
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MVKFLIGVAPLALIASGASAQTLPVQAAVTGTTTDPVAADPAPEGEQANVPADVVVLGFG
QSRQVQTITAADLGRLTPGTSPLKAISKLPGVNFQAADPFGAYEWSTRISLRGFNQNQLG
FTLDGVPLGDMSYGPTNGLHISRAIISENIGSTSVAQGAGALGTASTSNLGGTIQFTSRA
PSDTAALAASGTYGSNDTIRAFVRADSGDLGGGLKGYLSYSYLTTDKWKGFGSQRQHQAN
AKIVKDFGDRGSITGFFNFSDRRENDYQDLSLDIIKRRGYYNDNITNNYPLAILYAKQAT
NGAAAAAYARANNGSLTGFSAPYAGIGIGLPTGITLDDGYYDAAGLRRDYLGGVTFAAKL
TEALSLTSTSYYHHNKGQGSWITPYSPTQLGAPNADGTPITNPAPLSFRTTEYSLDRAGT
IAKLALTTGANKLELTGWYESNTLHQARRLYGMTDTATPNRSALDFQRNPMATVWNGKYD
TETLQYSVGDTLDIGQLTLNGGWKGMRVRNQANTLAGTLARGRIKSEDWFLPQVGAVLHL
GNQAEVFASYTENMRAFIAAATAAPFSISQAAFNSVAGTVRPEKSKTAEGGLRYRTGGLQ
LSAVGYYIDFSDRLLTYSVGTAIQGIPPTLNNVGGVESYGAEVSAFYRLTSAFSALASYS
YNHATYQQTVRDGSGNLLAEKGRYVVDTPQNMVKGELVYDDSRFFGRVGADYMSKRYFTY
LNDQSVAGRVLVDASIGYRFPKEWGGFAIEGSVTNLTDKRYISTIGTNGFTASGDNQTLL
AGAPRQWFVTLKKGF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagtttctgatcggtgtcgcgccgctggcgctgatcgcatcgggtgcgtcggcg
cagaccttgcccgtacaggccgccgtcaccggcacgaccaccgatccggtcgcggccgat
cccgcgcccgagggcgagcaggccaatgtcccggccgatgtcgtcgtgcttggcttcggc
cagagccgccaggtgcagacgatcaccgccgccgatctcggccggctgaccccgggcacg
tcgccgctcaaggcgatctcgaagctgccgggcgtcaatttccaggcggccgatccgttc
ggggcctatgaatggtcgacccgcatctcgcttcgcgggttcaatcagaaccagctgggc
ttcacgctcgacggcgtgccgctgggcgacatgagctatggtccgaccaacggcctgcat
atcagccgcgcgatcatctccgagaatatcggctcgaccagcgtggcgcagggtgcgggt
gcgctcggcaccgcctcgaccagcaatctgggcggcaccatccagttcaccagccgcgcg
ccgtccgacaccgccgcgctcgccgcctcgggcacctatggcagcaacgacacgatccgc
gcctttgtccgcgccgacagcggcgacctgggcggcggcctgaagggctatctgagctat
tcctatctaaccaccgacaagtggaagggtttcggcagccagcgccagcaccaggccaat
gccaagatcgtgaaggacttcggcgaccggggatcgatcaccggcttcttcaacttctcg
gatcgtcgcgagaacgactatcaggacctgagcctcgatatcatcaagcgtcgcggctat
tataacgacaacatcacgaacaattatccgctcgcgatcctctatgccaagcaggcgacc
aacggcgcggcggccgcggcctatgcgcgcgccaataacgggtcgctgaccggcttttcc
gcgccctatgccgggatcggcatcggcctgccgaccggcatcacgctggacgacggctat
tatgacgcggcgggcctgcgccgcgactatctgggcggcgtgaccttcgcggccaagctg
accgaggcgctgtcgctgacctcgaccagctattaccaccataacaagggccagggttcg
tggatcacgccctatagcccgacccagctcggcgcgcccaatgccgacggcacgccgatc
accaaccccgcgccgctgtcgttccggacgaccgaatatagcctcgaccgcgcgggcacg
atcgccaagctggcgctgaccaccggcgccaacaagctggagctgaccggctggtatgag
agcaacacgctgcaccaggcgcgtcgcctctatggcatgaccgacaccgcgacgccgaac
cgcagcgcgctggatttccagcgcaatccgatggcgaccgtctggaacggaaagtacgac
accgagacgctgcaatattcggtcggcgatacgctcgacatcggccagctgaccctcaat
ggcggctggaaggggatgcgagttcgtaaccaggcgaacacgctggcgggcacgctggca
cgcgggcggatcaagagcgaggactggttcctgccgcaggtcggtgcggtgctgcacctg
ggcaaccaggcggaagtcttcgccagctataccgagaatatgcgcgccttcatcgcggcg
gcgacggctgcgcccttctcgatcagccaggcggcgttcaattcggtcgcgggcaccgtg
cgccccgaaaagtcgaagacggccgaaggcggcctgcgttatcgcaccggcgggctgcag
ctgtcggcggtcggttattatatcgacttttccgaccgcctgctgacctattcggtcggc
accgcgatccagggtattccgccgacgctgaacaatgtcggcggcgtggaaagctatggc
gcggaggtttcggccttttaccgcctgacctcggccttctcggcgctggccagctattcc
tacaaccatgccacctatcagcagacggtgcgcgacggctcgggcaatctgctcgccgaa
aaggggcgttacgtcgtcgacacgccgcagaacatggtcaagggcgagctggtctatgat
gacagccggttctttggccgcgtcggcgcggactatatgtcgaagcgctacttcacctat
ctgaacgaccagtcggtcgcgggccgcgtgctggtcgacgccagcatcggttatcggttc
ccgaaggaatggggcggtttcgcgatcgagggcagcgtgaccaacctgaccgacaagcgg
tatatctcgaccatcggcaccaacggcttcacggccagcggcgacaaccagacgctgctc
gcgggcgcgccgcgccagtggttcgtgacgctgaagaaggggttctaa
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