Sphingomonas sp. LK11: AV944_17475
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Entry
AV944_17475 CDS
T04954
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splk03032
]
AV944_17475
03036 Chromosome and associated proteins [BR:
splk03036
]
AV944_17475
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_17475
DNA replication proteins [BR:
splk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AV944_17475
Chromosome and associated proteins [BR:
splk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AV944_17475
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AV944_17475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
APX67817
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All DBs
Position
unnamed2:14804..15073
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AA seq
89 aa
AA seq
DB search
MNISELAKGVAASTGSSEADAKKAITAVFDQIAAAAAKGDEVSIPGFGKFAVKDRPERQG
RNPATGEAMTIAASKKVAFTAAKGLKDKL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagtgagctggccaagggcgttgcagcgtcgacgggctcgagtgaggccgac
gccaagaaggcgatcacggcggtcttcgatcagatcgcggccgctgcggcgaagggcgac
gaggtctcgatcccagggttcggcaagttcgccgtcaaggatcggccggagcgtcagggc
cgcaaccctgcgaccggcgaggccatgacgatcgccgcgtcgaagaaggtcgccttcacg
gccgccaagggcctgaaggacaagctctga
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