Sphingomonas sp. LM7: BXU08_04690
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Entry
BXU08_04690 CDS
T04824
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
splm03009
]
BXU08_04690
Enzymes [BR:
splm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BXU08_04690
Ribosome biogenesis [BR:
splm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BXU08_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AQR73063
LinkDB
All DBs
Position
complement(1009915..1011444)
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AA seq
509 aa
AA seq
DB search
MSPSNPPETQRIAKLLARAGIASRREIERMIAEGRIALDGKVLDTPATLLTSLEGVTVDG
SPVAAPAPARLFRYHKPAGLLTTEHDPVGRPTIYDRLPDGLPRVMPVGRLDLSTEGLLLL
TTDGELKRELELPATGVERSYRARAYGQVSQPQLEELMLGVEIEGIRYGSINANIERRTG
ANVWIEMTLTEGKNREVRRVLEYLGLEVNRLIRTRYGPFWLGDLPPGDVDEIRQNELLTF
RTVLSKPGGGKTASNLQFAVRARVEPAPRPQPVVEPDRRMRRVIPKAAPAESTGPRFTPR
ATPPARGERPAYGEGHPPRTESRGPGTKPPARTERPDRADRRPPSGESRPKPGAWAPARA
ERPARDDTRPPARESRAAPRGTPPARAERPDRGEGRPTGGESRFKPGAKPPARGERPARD
DVHPPTREARFTPRSTPPARTDRPAREETRSVGKPARAARAKAHRDQQDPRAGEIVDRPR
TTRTTRPTKGPAGGRGKPAKPGRPPRSRK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgtccaatccccccgaaacccagcgcatcgccaagctgctggcccgtgccgga
atcgcgtcgcgccgcgagatcgaacgcatgattgccgaagggcgcatcgcgctcgacggc
aaggtgctcgatacccccgcgaccctgctcacctcgctcgaaggcgtgacggtggacggc
agtcccgtcgccgcgccggcgcccgcgcggctgttccgctatcacaagcccgccgggctg
ctcaccaccgagcatgatcccgtcggccgcccgacgatctacgatcgcctgcccgacggc
ctgccccgggtgatgccggtcggccggctcgacttgagcaccgaagggctattgctgctc
accaccgacggcgagctgaagcgcgagctggaactccccgccaccggcgtcgagcgcagc
tatcgcgcccgcgcctatggccaggtcagccagccccagctcgaggagctgatgctcggc
gtcgagatcgaaggcatccgctacggctcgatcaacgccaatatcgaacgccgcaccggc
gcgaacgtctggatcgaaatgaccctgacggagggcaagaaccgcgaagtccgccgcgtg
ctcgaatatctcgggctcgaagtgaaccggctgatccgcacccgctatggcccgttctgg
ctcggcgacctgcccccgggcgatgtcgacgagatccgccagaacgaattgctcacgttc
cgcacggtgctgtccaagccgggcggcggtaagaccgcgtcgaacctgcaattcgccgtc
cgcgcgcgcgtcgaaccggcgcccaggccccagccggtggtcgagcccgaccgccgcatg
cgccgcgtgatccccaaggctgcgcccgccgaatctacgggtccgcgcttcaccccccgt
gccaccccgcccgcgcgtggcgagcgcccggcctatggcgaaggccacccgccgcggacg
gaaagccgcggccccggcacgaagccacccgcccgcaccgagcgcccggaccgcgcagac
cgtcgccccccgagcggcgagtcgcgcccgaagcccggtgcttgggcacctgctcgcgcc
gagcgtcccgcacgcgacgatacccgtcccccggccagggagtcgcgtgctgcaccacgc
ggcacgccaccggcacgcgccgaacgtccggatcgcggcgagggtcgtccaaccggcggc
gagtcccgcttcaagcccggcgccaaaccacctgcgcgtggcgagcgccccgcccgcgac
gacgtccacccgccgacgcgcgaagcacgcttcacgccgcgcagcacgccgcctgcccgc
accgaccgcccggcgcgcgaggaaacccggtcggtcggcaagcccgcccgcgccgcgcgc
gccaaggcacatcgcgaccaacaggatccgcgcgctggcgagatcgtcgatcgtccccgc
accacccgcacgacccgtccgaccaagggccccgccggtggccgcggcaagccggccaag
cccggccgtccgccgaggagccggaaataa
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