Sphingomonas sp. LM7: BXU08_05240
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Entry
BXU08_05240 CDS
T04824
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BXU08_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splm03019
]
BXU08_05240
Messenger RNA biogenesis [BR:
splm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BXU08_05240
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AQR73164
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Position
1127339..1127833
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AA seq
164 aa
AA seq
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MTDITSLPYRPCAGVMLINRDGQVFVGQRLDSTLEAWQMPQGGIDPGEDPLDAAYRELWE
ETGVSREHVELVAAAPEELSYDLPDDLIGKVWKGKWRGQRQRWFLFRFLGDDTHINIATA
EPEFRAWRWAEPAELPDVIVPFKRDLYRQILDAFAAELGSVRRA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatcaccagccttccctaccgcccctgcgccggcgtgatgctgatcaaccgc
gacggccaggtgttcgtcggccagcgtctcgattcgacgctcgaggcctggcagatgccg
cagggcgggatcgatccgggcgaggatccgctcgacgccgcctatcgagagctgtgggag
gaaaccggggtttcgcgcgagcatgtcgagctggtcgccgcagcgcccgaggaactcagc
tacgacttgcccgacgacctgatcggcaaggtctggaagggcaaatggcgcgggcagcgg
cagcgctggttcctgttccgcttccttggcgacgacacgcacatcaacatcgccactgcc
gaacccgagttccgcgcgtggcgctgggccgaacccgccgagcttcccgacgtgatcgta
cctttcaaacgcgacctctatcgccagattctcgacgccttcgcagccgagctcggatcg
gttcgtcgggcgtaa
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