Sphingomonas sp. LM7: BXU08_07315
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Entry
BXU08_07315 CDS
T04824
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splm02000
]
BXU08_07315
Transporters [BR:
splm02000
]
Other transporters
Pores ion channels [TC:
1
]
BXU08_07315
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AQR73474
LinkDB
All DBs
Position
complement(1589153..1591837)
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AA seq
894 aa
AA seq
DB search
MRIRALLVGTASAFALLTGAAHAQTADDAPATAEAQEGEDIVVTGYRASLAAAIENKRNA
NSIIDSVSAEDVGKFPNTNVAEALTLVPGVTVDRQFGQGEKVSILGTDPALNRTLLNGQT
VASADWFILDSPGRTFNYALLAPQLVSRVDVYKSAEARIDEGSIGGTVNVITRKPLDLKP
FTVAGTLGYLYNDRSEKGDVQGSALVSWRNEAGTIGLLASFQRAKDRLRRDGLEAYGTIT
ADFWNGQNDAGTSSITTGNCTGTCATTLAANPDAVFPNAFGTSYFEQGRERLTYSAAAQW
KPVPELTVGVDYLRIDATYDNLNQSMYAFPGNTWNSAGALNGLQVQDGIVTQASFTNALS
VLDAQYRVAEMHSETWHGQIGWEGVNWNLNVEGGMSDADGGTKKQVFLEFLNWANYTVDI
SGAPGSPGTISYSTNVLGNPAAFATDPGWSGNLVEKPTTDKERYGQADLKFKFDGSLKSL
QLGYKYRRHETGQRYAGVTVAGVNAAASLFDTSQVSDNYLRGFNGVNDQMTGRFKINGES
MVDYVQGGSWVPGGGAVPTPSQFAAAEFTAGNWDVTEDIHAAYAQIDFEQGALHGNIGAR
YVHTASESAGYVCIPGTTCSTQANWTWESTSKTYEKVLPTINIAIGLKQDLIFRFAATQV
ISRPNYADMTNYFWLSDQILTGGGGNPDLDPYESDNFNASLEWYFAPRAILAAELFYKNV
TNYILQRTGVESHFNTSLGIVTNYDISRPFNAGSAQVKGFAIAYQQNLPYGFGLLANYTY
SDGKADSGADLPFNSRHQASLSPFFEAGPVSIRGTYTWRSKYFTGIDRGDQMYVRDTANV
DVSATYNITQNIGLTISGMNLTDSEYYAYANTPRLPRGVYRTGRRALASVNVNF
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcggattcgggctcttcttgtcggcaccgccagcgcgttcgcgctgctcacgggcgcc
gcgcacgcacagactgcagacgatgcgccggctacggccgaagcgcaggaaggtgaggac
atcgtcgtcaccggctatcgcgcctcactcgccgcggcgatcgagaacaagcgcaacgct
aattcgatcatcgactccgtatcggccgaggacgtcggcaaattccccaataccaacgtc
gccgaagcgctgacgctggttccgggcgtcaccgtcgatcgacagttcggccagggtgag
aaggtctcgatcctcggcaccgacccggcgctcaaccgcacgctgctcaatggccagacc
gtcgcgtcggccgactggttcatcctcgattcgccgggccgaaccttcaactacgcgctg
ctcgcgccgcagctggtcagccgggtcgacgtgtacaagtcggccgaagcgcggatcgat
gaaggttcgatcggcggcacggtcaacgtcatcacgcgcaagccgctcgacctcaagccg
ttcactgtcgccggcacgcttggctacctctataacgatcgctcggaaaagggcgacgtg
cagggctctgcgttggtcagctggcgcaacgaagcgggtacgatcggcctgctcgcctcg
ttccagcgtgccaaggaccggctccgccgcgacggtctcgaagcctatggcacgatcacc
gcggacttctggaacgggcaaaacgacgccggcaccagctcgatcaccacaggcaattgc
accggcacctgcgcgaccacgctcgccgccaatcccgatgcggtgttccccaacgcattc
ggcacgtcgtatttcgagcagggccgcgaacggctgacctattcggcggcggcgcagtgg
aagccggtgcccgagctcacggtcggcgtcgattatctccgcatcgatgcgacctatgac
aacctcaaccagtcgatgtacgccttcccgggcaacacctggaatagcgccggcgcgctg
aacggcttgcaggtgcaggatggcatcgtcacccaggcgtcgttcaccaacgcgctctcg
gtgctcgacgcgcagtatcgcgtcgccgagatgcattccgagacgtggcacggccagatc
ggctgggaaggcgtgaactggaacctgaatgtcgaaggcggcatgtccgacgccgatggc
ggcaccaagaagcaggtgttcctcgaattcctgaactgggccaattacaccgtcgatatc
agcggcgcgcccggcagccctggaacgatcagctacagcaccaacgtgctcggcaatccc
gcggcctttgcgaccgatccgggctggagcggcaatctcgtcgagaagccgaccaccgac
aaggagcgctacggtcaggccgacctcaagttcaagttcgacggcagcctcaagagcctg
cagctcggctataaataccgccgccacgagactggtcagcgttatgccggcgtcaccgtc
gcaggcgtcaatgctgccgcatcgctgtttgataccagccaggtgagcgacaattatctg
cgcggcttcaatggcgtgaacgaccagatgaccggccgcttcaagatcaacggcgagtcg
atggtcgattacgtccagggcggcagctgggtgcccggtggcggggcggtgccgacgccg
tcgcaattcgccgcggctgagttcaccgcgggcaattgggacgtgaccgaggacatccac
gccgcctatgcccagatcgatttcgaacagggtgcgctgcacggcaatatcggcgcgcgc
tatgtgcacaccgccagcgagagcgcgggttatgtctgcattccgggcacgacgtgcagc
acgcaggccaactggacctgggagagcaccagcaagacctatgagaaggtcttgccgacg
atcaacatcgcgatcggtctcaagcaggaccttatcttccgcttcgccgcgacgcaggtg
atctcgcggcccaactatgccgacatgaccaattatttctggctgtcggaccagatcctc
accggcggcgggggcaatcccgatctcgatccgtatgaatcggacaatttcaatgcctcg
cttgaatggtatttcgcgccgcgcgctatcctcgccgccgagctgttctacaagaacgtc
accaattacatcctccagcgcactggggttgaaagccatttcaacacgtcgctcgggatc
gtcaccaactacgacatcagccgtccgttcaatgccggttcggcgcaggtgaagggcttc
gcaatcgcctatcagcagaaccttccctacggcttcggcctcctcgcaaactacacctac
tccgacggcaaagccgatagtggggcagacttgccgttcaattcgcggcatcaagctagt
ctgagcccgttcttcgaggctggcccggtctcgatccgcgggacttatacctggcggtcg
aaatacttcactggcattgatcgcggtgaccagatgtacgtccgcgataccgcgaacgtc
gatgtctcggcgacctacaacatcacccagaatatcggcctgaccatctctgggatgaac
ctcaccgacagcgaatattacgcctatgccaacacgccgcgcctgccgcgcggggtctat
cgcactggccgccgggcactcgcctcggtcaacgtcaacttctga
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