Sphingomonas sp. LM7: BXU08_08825
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Entry
BXU08_08825 CDS
T04824
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splm03032
]
BXU08_08825
03400 DNA repair and recombination proteins [BR:
splm03400
]
BXU08_08825
Enzymes [BR:
splm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BXU08_08825
DNA replication proteins [BR:
splm03032
]
Prokaryotic type
DNA Topoisomerases
BXU08_08825
DNA repair and recombination proteins [BR:
splm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BXU08_08825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AQR73732
UniProt:
A0A1S6FJC2
LinkDB
All DBs
Position
1953802..1954815
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AA seq
337 aa
AA seq
DB search
MTLDAIVYVDDHEPGITRRKVRHGWGYWAPDGKRITDRDEIDRLNKIGLPPAYVDAWFCP
DPNGHIQAVGWDDRHRKQYRYHTGFRDAQEAAKYDRCAGFGHRLPKLRERVEADLKLRGL
CKQKAVAAVVRLLDLGTIRVGNESYAQENKSFGATTLRKRHVKVKGQTLKLQFRAKSGKL
RVMTITDRTLSSFVKRCQDLPGQNLFRWVDDAGDAHPVTSTDVNAYIREAMADDFTAKNF
RTWGASVLAFEALASATTYLGIKTMLEPVTEALGNTPSIARKSYVHPRLIELAKNKDAQA
EFRAGLRLPRATRYLTRYERGLISFLEESAAPQAKAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgacgccatcgtctatgtcgatgatcacgaaccgggaataacgcggcgcaag
gttcgccacggctggggctattgggccccggacggcaagcggatcaccgatcgggacgag
atcgaccggctgaacaagatcggcctgcccccggcctatgtcgatgcatggttctgcccc
gatcctaatggacacatccaggcggtcggctgggacgacaggcatcgcaagcaatatcgc
taccacaccggcttccgcgacgcgcaggaggcggccaaatatgatcgctgtgccggcttc
gggcatcgcctgcccaagctgcgcgaacgcgtcgaggccgacctcaagctgcgcggactg
tgcaagcagaaggccgttgccgcggtcgtccgcctgctcgatctcggcacgatccgcgtc
ggcaacgagtcctacgcgcaggagaataagagcttcggcgccaccacgttgcgcaagcgc
cacgtcaaggtgaaggggcagacgctcaagctccagttccgcgccaaatcgggcaagctg
cgcgtgatgacgatcaccgaccggactttgtcgagtttcgtcaagcggtgccaggatttg
cccgggcagaatttgttccgttgggtcgatgacgccggcgatgcgcatccggtcacttcg
accgacgtcaacgcctatatccgcgaggcgatggccgacgatttcactgctaagaacttc
cgcacctggggcgccagcgtgctggcgttcgaggcgctggccagcgccaccacctatctc
ggcatcaagacgatgctcgaaccggtgaccgaagcgctgggcaatacgccttcgatcgcg
cgcaaatcctatgtccatccgcggctgatcgagctggccaaaaacaaggacgcgcaagcc
gaattccgtgccgggttgcgcctgccgcgcgccacccgctacctcacgcgttacgagcgc
ggtctgatctctttcctcgaagagagcgccgcgccgcaagccaaggcagcctga
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