Sphingomonas sp. LM7: BXU08_11315
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Entry
BXU08_11315 CDS
T04824
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm00020
Citrate cycle (TCA cycle)
splm00190
Oxidative phosphorylation
splm00650
Butanoate metabolism
splm00720
Other carbon fixation pathways
splm01100
Metabolic pathways
splm01110
Biosynthesis of secondary metabolites
splm01120
Microbial metabolism in diverse environments
splm01200
Carbon metabolism
Module
splm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
splm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
splm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BXU08_11315
00650 Butanoate metabolism
BXU08_11315
09102 Energy metabolism
00190 Oxidative phosphorylation
BXU08_11315
00720 Other carbon fixation pathways
BXU08_11315
Enzymes [BR:
splm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BXU08_11315
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
S-Me-THD_N
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AQR74159
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Position
2445489..2447291
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AA seq
600 aa
AA seq
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MPAAYKIIDHTYDAVVVGAGGSGLRATMGAAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWSWHMFDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYVEYFALDLIMENGA
CRGVIALCMEDGSIHRFRSHSVVLATGGGGRVYQSATSAHTCTGDGNGMALRAGIALQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVARSMAME
IREGRGVGKEKDHIFLHLNHIDPKILHERLPGITETGKIFAGVDLTRQPLPVVPTVHYNM
GGIPTNYHGEVVHNKDGNPDTVIPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
RLKEIVKPGTAHAALPANSEEFSLTRLDHFRNAKGAKPTAQIRADMQKTMQRHCAVFRDS
ALLAEGVTHMDAVYQSFQDVGISDRSLIWNTDLVETLELDNLIGQAVVTIQCAANRKESR
GAHMHEDFPDRNDAEWMKHTVATFEGWGGKQGGVAIDYRPVHDYTLTDEIEYIKPKKRVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcgtacaagatcatcgatcacacctatgacgccgtcgtcgtcggcgccggc
ggttcgggcctgcgcgccaccatgggcgcggccgaagccggcctcaagacggcgtgcatc
accaaggtgttcccgacgcgcagccacaccgtggccgcacagggcggcatcgcggcatcg
ctcggcaacaatagccccgatcactggtcgtggcacatgttcgacaccgtcaagggctcc
gactggctcggcgaccaggacgcgatcgaatatatggtgcgcgaggcgcccgccgcggtc
tacgagctcgagcatgctggcgtgccgttcagccgcaacgacaacggcacgatctaccag
cgcccgttcggcggccacatgcagaatatgggtgaaggcccgccggtccagcgcacctgc
gccgccgccgaccgcaccggccacgcaatgctgcacgcgctctaccagcagagcctgaag
tacgacgccgacttctacgtcgaatatttcgcgctcgacctgatcatggagaacggcgcc
tgccgcggcgtgattgctttgtgcatggaagacggcagcatccaccgcttccgcagccat
tcggtcgtgctcgccaccggcggcggcggccgcgtctaccagtcggcaacctcggcacac
acctgcaccggcgacggcaacggcatggcgctgcgcgccggcatcgcactgcaggacatg
gagttcgtccagttccacccgaccggcatctacggcgccggcgtgctgatcaccgagggc
gcgcgcggcgaaggcggctatttgaccaactccgagggcgagcgcttcatggagcgctat
gcccctagcgcgaaggatctcgccagccgcgacgtcgtcgcccgctcgatggcgatggag
atccgcgagggccgcggcgtcggcaaggagaaggatcacattttccttcacctgaaccat
atcgacccgaagatcctgcacgagcggctgcccggcatcaccgagaccggcaagatcttc
gccggcgtcgacctcacccgccagccactgccggtggtaccgaccgtccattacaatatg
ggcggcatcccgaccaactatcacggcgaagtcgtccacaataaggacggcaatcccgac
accgtcatccccggcctgttcgcggtcggcgaggcggcatgcgtctcggttcacggcgcc
aaccgccttggctcgaactcgctgatcgatctcgtcgtgttcggccgcgccaccggcctg
cgcctcaaggaaatcgtcaagcccggcaccgcgcacgcggcgctgccggcaaattcggaa
gagttttcgctcacccgtctcgaccatttccgcaacgccaagggtgcgaagcccactgcg
cagattcgcgccgacatgcaaaagacgatgcagcgccactgcgccgtgttccgcgacagc
gcattgctcgccgaaggcgtcacccacatggacgccgtctatcagagcttccaggacgtc
ggcatctccgaccggtcgctgatctggaacaccgatctggtcgagacgctcgaactcgac
aatctgatcggccaggccgtggtgacgatccagtgcgccgccaaccggaaggaaagccgc
ggtgcacacatgcacgaggacttccccgatcggaacgacgccgagtggatgaagcacact
gttgcgacattcgaaggctggggcggcaagcagggcggcgtcgcgatcgactatcgcccg
gtgcacgactacacgctgacggacgagatcgagtatatcaagccgaagaagcgggtgtac
tga
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