Sphingomonas sp. LM7: BXU08_11630
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Entry
BXU08_11630 CDS
T04824
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splm02000
]
BXU08_11630
Transporters [BR:
splm02000
]
Other transporters
Pores ion channels [TC:
1
]
BXU08_11630
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AQR74216
LinkDB
All DBs
Position
2520616..2523444
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AA seq
942 aa
AA seq
DB search
MRYRRIIASALAGTALCLWGGPAAAQTAGDEALIDSPTQDEPAAEGDIVVLGSRIPRVQA
EGPAPVTTITSDDILRNGYQSVPDVLRAITQNGGETQSQQSFSGADFTPGAQQVDLRGLG
PNHTLVLVNGRRIADFPLPYGGNSNFTDISNIPVGLIEQVQVLSGSASAIYGSDAISGVV
NFQLKSKPDGTRIDYRAGFTEHGGGSSQRLSLTTGWETGGFHGVVGIELIDQRPLWAYQR
RLQDSTADSPTTDYPIARRNFLRTDEDNDYLDPGAAVCASLAGLNGGTTYHARRPEYGYD
IANDEYVDGRYCGSNEAIGYGTTISDRRAASLYGAMGYTLSDKAELFIDVQASYSKLKLF
RDVLDWFYVAPDGNEEGTFFNPNMPADLTYSGDQLDNWYRMFTPEEMGGLDKGMTRNRSF
TYNITPGIRGKLGGAWSYEVAYNHAEYSSKIEFPQVVIDKANAFFLGSQIGEENGYPAFN
ADVARLYKPLTPAEYASITALSTYRPKTWVNNVSATVNTTNLFQLPAGPVGFAAVAEVGN
QGYEMNPDPLALSQYYVGLIDSDGKGTRQHWGAGGELRVPAFTFLELSGAGRYDHYSFAG
NGFGKFTYNLGAELRPMKSLLIRGAYGTGFRAPDLHYVFKGPGNTHTGGTDYYLCRADGQ
EIGDCDFDDMDFIARHNGNRRLRPETSTSINAGMFFQPTRNIDFSADYFRVKMKNQVLNM
SIDSVLRDEADCLLGVTASGSAVNPASPTCIDALARIQRYDGGALDGEIQSVSINPINIA
EETTDGIDFAAHLRVPTGIGQFSLAASYTYVLNHTIRQYPGDAQVDKLAFDSGYYIPRDK
ATASLTWDLGRFSTTLNGQRLSRLPNYAEDAYIKASYLFNLSAQYDLNDRLRLSGTVNNL
FDQNPIKDRTYSGYPYYDTSWFDGVGRSFYLQLTYKMGGATL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcgttaccggaggatcatcgcgtcggcattggcgggcacggccttgtgcctgtggggc
ggccctgccgccgcgcagacagccggcgacgaagcactgatcgattcccccacgcaggac
gagcccgcggccgagggcgacatcgtcgtgctcggatcgcgcatcccgcgggtccaggcc
gagggcccggcgccggtcacgacgatcacctcggacgacatcctgcgcaacggctatcag
agcgtacccgatgtgctgcgcgcgataacgcagaatggcggggagacgcagagccagcag
agcttctctggcgccgactttactcccggcgcgcagcaggtcgatctgcgcgggctcgga
ccgaaccacacgctggtgctggtcaatggccgccgcatcgccgatttcccgctgccctat
ggcggcaacagcaactttaccgacatctcgaacatcccggtcgggttgatcgagcaggtc
caggtactgagcggcagcgcctcggcaatctacggctccgacgcgatttcgggcgtggtc
aacttccagctcaagtccaagccggacggcacgcggatcgattaccgcgccggctttacc
gaacatggcggcggcagctcgcagcggctgtccctgaccaccggctgggagaccggtgga
ttccacggcgtcgtcggcatcgagctgatcgatcagcggccgctatgggcgtaccagcgg
cgcctccaggattcgacggcggacagcccgaccaccgactatccgatcgcacgccgcaac
ttcctgcgcaccgatgaggataatgactacctcgatcccggcgcggcggtctgcgcgtcg
ctcgccggactcaatggcggcaccacctatcacgcccgccgcccggaatatggctatgac
atcgccaacgacgaatatgtcgacggccgctattgcggcagcaacgaagcgatcggctat
gggacgacgatcagcgaccgccgcgccgccagcctctacggcgccatgggctataccctg
agcgacaaggccgagctcttcatcgacgttcaggcaagctattcgaagctcaagctgttc
cgcgacgtgctcgactggttctacgtcgcgcccgacggcaatgaggaaggcaccttcttc
aacccgaacatgcccgccgacctaacctatagcggcgaccagctcgacaattggtatcgt
atgttcacgcccgaagagatgggcggactcgacaagggaatgacgcgcaaccgctcgttc
acctacaacatcacgccgggtatccgcggcaagctgggcggcgcctggagctacgaagtc
gcgtacaaccacgccgaatacagttcgaagatcgaatttccccaagtcgtgatcgacaag
gccaacgccttcttcctcggatcgcagatcggcgaggagaatggctaccccgccttcaac
gccgacgtcgcccgtctctacaagccgctgactccggccgagtatgcttcgatcaccgct
ctatcgacctatcgcccgaagacctgggtcaacaatgtctcggcgacggtcaacaccacc
aacctgttccagcttcccgccggaccggtgggcttcgccgcggtcgccgaagtcggcaac
cagggttatgaaatgaatcccgatccgctcgcgctgagccaatattacgtcggcctgatc
gattccgacgggaaaggcacccgccagcattggggcgcgggcggcgagcttcgcgtgccg
gccttcaccttcctcgagctgagtggggcggggcgctacgatcattacagcttcgccggc
aacggtttcggcaagttcacctacaatctcggcgccgagctgcgcccgatgaagagcctg
ctgatccgcggcgcctatggcaccggcttccgtgcgcctgacctccattatgtgttcaag
ggtcccggcaacacccacaccggcggcaccgattattatctctgccgcgcggacggccag
gagatcggcgactgcgacttcgacgacatggatttcatcgcccgccacaacggcaatcgc
cggctgcggcccgagacctcgacctcgatcaacgccggcatgttcttccagccgacccgc
aatatcgacttctcggcggactatttccgcgtgaagatgaagaaccaggtgctcaacatg
agcatcgactcggtgctccgtgacgaggccgactgcctgctcggcgtcaccgccagcggc
agcgcagtcaatcccgcctcgccgacttgcatcgatgcgctcgcccgcatccagcgctat
gacggcggtgcgctcgatggcgagattcaatcggtctcgatcaacccgatcaacatcgcc
gaagagaccaccgacggcatcgacttcgccgcgcacctccgcgtgcccacgggcatcggc
cagttctcgctcgcggcaagctacacctatgtgctcaaccacacgatccgccagtatcca
ggcgatgcgcaggtcgacaagctggcgttcgacagcggctactacatcccgcgcgacaag
gcgacggcgagcctgacctgggacctgggccgcttctccaccacgctcaacggccagcgg
ctgagccggctgcccaattacgccgaggacgcctatatcaaggcgagctacctgttcaat
ctgtcggcccagtacgacctcaacgatcgtcttcgcctctccggcacggtcaacaatttg
ttcgaccagaacccgatcaaggaccgcacctatagcggctatccctattacgacacgtcg
tggttcgacggagtcgggcgcagcttctacctccagctgacctacaagatgggaggggcg
acgctgtga
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