Sphingomonas sp. LM7: BXU08_12395
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Entry
BXU08_12395 CDS
T04824
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm00300
Lysine biosynthesis
splm00470
D-Amino acid metabolism
splm01100
Metabolic pathways
splm01110
Biosynthesis of secondary metabolites
splm01120
Microbial metabolism in diverse environments
splm01230
Biosynthesis of amino acids
Module
splm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BXU08_12395
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BXU08_12395
Enzymes [BR:
splm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BXU08_12395
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AQR74343
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All DBs
Position
2686918..2687835
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AA seq
305 aa
AA seq
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MRFAFTKCHGSGNDFPLIDARDLALDDADWARVAQALADRSGPVGGDGLLLLVNGDSDHA
FGMRMFNSDGSEAETCLNGLRCVARAGFEALGVDTAHVKLKTSSAAVAREAELAPGVVTV
RTTVGPASTELADVGLRGPLSELPSDRSFTAVAMPNPHLVTFVDAVDEGELVALGEYCEG
APALIPGRANVSFVALRGPDLFVRTFERGVGLTDSCGSAMAASVLAASLTGHVPIDADIR
VFNKGGLVRGRAGADRVVTISGNATFVYDAHIDIDLARGRADALEILARRDGEVAAWDAA
VAALG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgccttcaccaaatgccatggctcgggaaatgatttcccgctgatcgacgca
cgcgacctcgcgctggacgacgccgattgggcgcgcgttgcgcaggcgctcgccgaccgt
agcggcccggtgggcggcgacggactgctgctgctcgtcaacggtgacagcgaccatgcc
ttcggaatgcggatgttcaattcggacgggtccgaggcggagacctgcctcaatggcctg
cgctgcgtggcgcgcgcaggattcgaggcgctgggcgtggataccgcgcacgtgaagctc
aagacgagctcggccgcagtcgcacgcgaagccgagcttgcgccgggcgtcgtcacggtg
cgcacgacagttggccccgcctcgaccgagctggccgatgtcgggctgcgcgggccgctg
tccgagctgccgagcgaccgcagctttacggcggtggcgatgcccaacccgcatctcgtc
accttcgtcgatgccgtcgacgaaggtgagctggtggcactcggcgaatattgcgagggc
gcccccgcgctgatccccggccgcgccaacgtctccttcgtcgcgctgcgcggccccgac
ctgttcgtccgcaccttcgaacgcggcgtcgggctgaccgacagctgcgggagcgcgatg
gccgcatcggtgctcgccgcgtcgctcaccggccacgtgccgatcgacgccgacatccgc
gtgttcaacaagggcgggctggtccgcggccgcgccggcgccgaccgcgtcgtgacgatc
agcggcaacgcgaccttcgtgtacgacgcgcatatcgacatcgacctcgcgcgcggccgc
gccgatgcgctcgagatcctcgcccggcgcgacggcgaagtcgcagcctgggatgccgcg
gtcgccgcgctcggctga
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