Sphingomonas sp. LM7: BXU08_12570
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Entry
BXU08_12570 CDS
T04824
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splm03016
]
BXU08_12570
Enzymes [BR:
splm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BXU08_12570
Transfer RNA biogenesis [BR:
splm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BXU08_12570
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
AQR74373
UniProt:
A0A1S6FLL3
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All DBs
Position
2724397..2724918
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AA seq
173 aa
AA seq
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MPAPRPLYIFAKPPEQTALEAEQRRRELGLANDYSHERFHTTILPLCDASEAPPGLIGTL
EAAFASMLAEPCTILFDRLHRNALRGGSALRDLRALQATLVRRLTAMGLLLPRYLFRPHM
SLAYGASTERTIPIAPIGWQVRELQLVKSIHGEGRHETLARFELIQRQGAFGF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaccccgcccgctctacatcttcgccaagccgcccgagcaaaccgcgctcgaa
gccgagcagcggcgtcgcgaactcggcctcgccaacgactacagccacgaacgattccac
acgacgatcctgccactctgcgacgccagcgaagcgccgccgggactgatcggcacgctg
gaggccgccttcgcctcgatgctcgccgagccctgcacgatcctgttcgaccggctccac
cgcaatgcgctgcgcggtggcagcgcgctccgcgacctgcgcgcgctgcaagccacgctg
gtcaggcgcctgaccgcgatgggcctgctcctgccgcgctaccttttccgtccgcacatg
tcgctcgcttatggcgcgtcgaccgaacggacgataccgatcgcgccgatcggctggcag
gtgcgcgagctgcagctcgtaaagagcatccacggtgaaggccgccacgaaacgcttgcg
cgcttcgaactgatccagcgccaaggggcgttcggcttctga
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