Sphingomonas sp. LM7: BXU08_12985
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Entry
BXU08_12985 CDS
T04824
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm00061
Fatty acid biosynthesis
splm00071
Fatty acid degradation
splm01100
Metabolic pathways
splm01212
Fatty acid metabolism
splm02024
Quorum sensing
splm04146
Peroxisome
Module
splm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BXU08_12985
00071 Fatty acid degradation
BXU08_12985
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BXU08_12985
09145 Cellular community - prokaryotes
02024 Quorum sensing
BXU08_12985
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
splm01004
]
BXU08_12985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
splm04147
]
BXU08_12985
Enzymes [BR:
splm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BXU08_12985
Lipid biosynthesis proteins [BR:
splm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BXU08_12985
Exosome [BR:
splm04147
]
Exosomal proteins
Exosomal proteins of breast milk
BXU08_12985
Exosomal proteins of breast cancer cells
BXU08_12985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AXIN1_TNKS_BD
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AQR74447
UniProt:
A0A1S6FLL2
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All DBs
Position
2807319..2809007
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AA seq
562 aa
AA seq
DB search
MTDPEHVWRTAFHHPGKWDDSFPPTTMVTLFEESARAHPQAPLLDFMGRKYSYAETLDGA
NRVACGLKALGYGRGDRIGLFLPNVPHYVAAYYGILKLGATVVNFSPLYSVEELSAQVED
SGTRLLFTLSATALLPTALKVLEQSGLERLVIGSVAGALPPAKSLFYRWFKAKEVAPRPH
DPRILAFSQLIANEGTCAPLDLDPEKDVALIQYTGGTTGVPKGAVLTHQNLSANARQVAR
LDPDLGKVPDSILGVLPFFHVFANTCVLNRTVLTGGQIAMLPRFNAKQALATLRRTRPRS
LPGVPTMYQALLDAPGMKPGDFSSLRYCISGGAPLPAQLKEEWERITGARVIEGYGLSES
SGVVSTNPYAGLNKSGTIGQPLAATRVRLVDKEDPTRPPPPGEPGEIVVSGPQIMQGYWN
RPDADAETFVDDHWLRTGDVGTIDEDGFIRIVDRLKDMIAVGGFKVFPSQIEAVLYRHPA
VKEALVIGLPDAYHGELPHAYVVLDADAEPISGPDLSLWLNAQLGKHERVAQVVIRESLP
KTMIGKLSRKDLIAEVSASAAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccgagcacgtctggcgcaccgcgttccatcacccgggcaagtgggacgat
tcgttcccgcccaccaccatggtcacgctgttcgaggaaagtgcccgcgcccatccgcaa
gcgccgctgctcgatttcatgggccggaagtacagctacgccgagacgctggacggcgcc
aatcgcgtcgcctgcgggctcaaggcgctcggctatggccgtggcgaccgcatcgggctg
ttcctgcccaacgtcccccattatgtcgcggcctattacggcatcctcaagctcggcgcg
acggtggtcaatttctcgccgctctattcggtcgaggaattgtccgcgcaggtcgaggat
tcgggcactaggctgctgttcaccctctccgccactgcgctgctgcccaccgcgctcaag
gtgctcgaacaaagcggcttggagcggctggtgatcggttcggtggcgggcgcgttgccg
cccgccaagtcgcttttctatcgctggttcaaggcaaaggaagtcgccccccggccgcac
gacccgcgcatcctcgccttctcgcagctgatcgccaatgaaggcacctgcgcgccgctc
gatctcgatcccgagaaagacgtcgcgctgatccagtataccggcggcaccaccggcgtc
cccaagggcgcggtgctcactcaccagaacctgtccgccaatgcgcggcaggtcgcgcgg
ctcgatcccgatctcggcaaggtccccgattcgatcctcggcgtgctccccttcttccat
gtcttcgccaacacctgcgtgctcaaccgcacggtgctgaccggcggccagatcgcaatg
ctgccgcgcttcaacgccaagcaggcgctcgccacgctccgccgcacccgcccgcgctcg
ctccccggcgtgccgaccatgtaccaggcgctgctcgacgcgccggggatgaagcccggc
gacttttccagcctgcgctactgcatctcgggcggcgccccgctccccgcccagctcaag
gaagagtgggaacgcatcaccggcgcgcgggtgatcgagggctatggcctgtccgaaagc
tcgggcgtggtctcgaccaatccctatgccgggctcaacaagtccggcacgatcggccag
cccctcgccgccacccgcgtccgcctggtcgacaaggaagaccccacgcgtcccccgccc
cccggcgagcccggcgagatcgtcgtctccggcccgcagatcatgcagggctattggaac
cgcccggatgccgacgcggaaaccttcgtcgatgaccattggctgcgcaccggcgacgtc
ggcacgatcgacgaggacggcttcatccgcatcgtcgaccgtctcaaggacatgatcgcc
gtcggcgggttcaaggtgttcccgagccagatcgaggcggtcctgtatcgccacccggcc
gtgaaggaggccctcgtgatcggcctgcccgacgcgtaccatggcgagctgccccacgcc
tatgtcgtgctcgacgccgatgccgagccgatctcgggccccgatctcagcctctggctg
aacgcccagctcggcaagcacgagcgcgtcgcccaggtcgtgatccgcgagagcctgccc
aagacgatgatcggcaaattgagccgcaaggatctgatcgcggaggtcagcgccagcgct
gcggcgtga
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