Sphingomonas sp. LM7: BXU08_13325
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Entry
BXU08_13325 CDS
T04824
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm00300
Lysine biosynthesis
splm00470
D-Amino acid metabolism
splm01100
Metabolic pathways
splm01110
Biosynthesis of secondary metabolites
splm01120
Microbial metabolism in diverse environments
splm01230
Biosynthesis of amino acids
Module
splm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BXU08_13325
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BXU08_13325
Enzymes [BR:
splm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BXU08_13325
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AQR74505
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Position
complement(2881597..2882856)
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AA seq
419 aa
AA seq
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MDHFNLIDGELHVENVPLARIAEAVGTPVYVYSAATFQRHARAFRDGLAAIPRKHLAFAV
KANPNLAVLRLLANEGFGADVVSGGELARALAAGMAAKDVVFSGVGKTRAELDQALSVGI
GQFNLELEEEGVVLSQLAAARGLRAPATLRVNPDVDAGTHEKISTGRAENKFGLPIDEAP
AIFDRLAPLPGLNLRGVAVHIGSQLQSLAPLERAFERVGKLVAELRAAGHTITHVDLGGG
LGVRYREGDTPPTPAEFGEMVARVTQGWDVELMFEPGRVISANAGVLLTEVLWVKPGPVN
PWVIVDSAMNDLARVALYDAYHDFESVRPSGEKFVANVAGPVCESSDVFAKGREIDVVQS
GDLAILRSAGAYGATMASTYNSRPLVPEVLVSGDRFEVVAGRISAEAIMAEEHVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcaatctgatcgacggcgagctgcacgtcgagaacgtcccgctcgcgcgg
atcgccgaggcagtcggcacccccgtctacgtctattcggccgcgaccttccagcgccac
gcccgcgccttccgcgacggcctcgccgcgatcccgcgcaagcacctcgccttcgcggtc
aaggccaatcccaatctcgcggtgctccgcctgctcgccaatgaaggcttcggtgccgac
gtcgtttcgggcggcgagctggcgcgtgcgctggcggcgggcatggcagcgaaggacgtc
gtcttctcgggcgtcggcaagacccgcgccgagctcgatcaggcgctcagcgtcggtatc
ggccagttcaacctcgagctcgaggaagagggcgttgtcctctcgcagctcgccgccgca
cgcggcctccgcgcccctgcgacgctgcgggtgaatcccgatgtcgacgccggcacgcac
gagaagatctcgaccggccgcgccgagaacaagttcggcctgccgatcgacgaggccccg
gcgatctttgatcggctggcgccgctgcccgggctcaacctgcgcggcgtcgctgtccat
atcggcagccagcttcagagcctcgcgccgctggagcgcgcgttcgagcgcgtcggcaag
ctcgtcgcggagctgcgcgccgcggggcacaccatcacccatgtcgatctcggcggcggt
ctcggcgtgcgctatcgcgaaggcgacacgccgccgactccggccgaattcggcgagatg
gtcgcacgcgtcacccagggctgggacgtcgaactgatgttcgaacccggtcgggtgatc
tcggccaatgccggcgtgctgctgaccgaagtgctgtgggtcaagcccggtccggtgaac
ccctgggtcatcgtcgattcggcgatgaatgaccttgcgcgcgttgcgctgtacgatgcc
tatcacgatttcgaatcggtgcgcccgagcggcgaaaagtttgtcgccaatgtcgccggc
ccggtctgcgagagcagcgatgtcttcgccaaggggcgcgagatcgatgtggtgcagtcg
ggcgacctcgcgatcctgcgcagcgccggggcctatggcgcgacgatggcaagcacctac
aacagccgcccgctggtccccgaagtgctcgtctctggcgacaggttcgaagtggtcgcc
ggtcgcatctcggccgaagcgatcatggccgaggaacatgtcccggactggctgaaatga
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