Sphingomonas sp. LM7: BXU08_13770
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Entry
BXU08_13770 CDS
T04824
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
splm
Sphingomonas sp. LM7
Pathway
splm02020
Two-component system
splm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXU08_13770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BXU08_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splm03021
]
BXU08_13770
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
splm02035
]
BXU08_13770
Transcription machinery [BR:
splm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXU08_13770
Bacterial motility proteins [BR:
splm02035
]
Flagellar system
Flagellar assembly proteins
Stator
BXU08_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AQR74573
LinkDB
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Position
complement(2982348..2983082)
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AA seq
244 aa
AA seq
DB search
MASLAPAPLTYDRAPSPQRDAEAMVRKHLPLVRRIAWHIHGSMSSIVEIEDLIQIGMVAL
IEAVTGFEDRGQVTFEQYLMTRVRGAMIDELRRQATLTRGAMRRRKAYQETVAMLATELG
HAPSDLQVAEKLGVTPEKLRAEYATAEAVRFDSIDDMYSDESPWFMSDEPNAFDQLADGD
QREALIAAIGELPEREAQVIQLYYVEELNLEEIGQVLGVGAARICQIKASAHARLKRALG
RRLG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggcacccgctccgctgacctatgaccgcgcgccgtcaccgcaacgcgat
gccgaggcgatggtgcgcaagcatctgccgctggtgcgccgcatcgcgtggcacatccat
ggatcgatgagctcgatcgtcgagatcgaggatctcatccagatcggcatggtcgcgctg
atcgaggccgtgaccggcttcgaggaccgcggccaggtcaccttcgaacaatatctgatg
acgcgcgtacgcggcgcgatgatcgacgagctgcgccgccaggcgacgctgacgcgcggc
gcgatgcggcgccggaaagcctatcaggagaccgtcgccatgctcgccaccgaactgggc
cacgccccgagcgacctgcaggtcgccgagaagctcggcgtcactcccgaaaagcttcgc
gccgaatatgccactgccgaggcagtgcgcttcgattcgatcgacgacatgtattcggac
gaatcgccatggttcatgtccgacgagcccaatgccttcgaccaactcgccgatggcgac
cagcgcgaggcactgatcgcggccatcggcgaattgcccgagcgcgaggcgcaggtgatc
cagctttactatgtcgaggaattgaacctcgaggaaatcggccaggtgctcggcgtcggc
gccgctcggatctgccagatcaaggcctcggcgcatgcgcgcctcaaacgggcgcttggg
cgccggctgggctag
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