Sphingomonas sp. LM7: BXU08_14065
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Entry
BXU08_14065 CDS
T04824
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
BXU08_14065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splm03019
]
BXU08_14065
03009 Ribosome biogenesis [BR:
splm03009
]
BXU08_14065
04131 Membrane trafficking [BR:
splm04131
]
BXU08_14065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
splm04147
]
BXU08_14065
Messenger RNA biogenesis [BR:
splm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
BXU08_14065
Ribosome biogenesis [BR:
splm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BXU08_14065
Membrane trafficking [BR:
splm04131
]
SNARE
SNARE associated proteins
Others
BXU08_14065
Autophagy
Aggrephagy
Other aggrephagy associated proteins
BXU08_14065
Exosome [BR:
splm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BXU08_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
CDC48_2
AAA_2
TIP49
AAA_14
IstB_IS21
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
AAA_18
Mg_chelatase
AAA_7
AAA_3
DUF815
AAA_30
AAA_24
ABC_tran
AAA_17
AAA_11
TsaE
Vps4_C
Sigma54_activat
Parvo_NS1
Zeta_toxin
AAA_25
NB-ARC
Viral_helicase1
PhoH
SLFN-g3_helicase
ATPase
Motif
Other DBs
NCBI-ProteinID:
AQR75908
UniProt:
A0A1S6FQQ1
LinkDB
All DBs
Position
complement(3033393..3035681)
Genome browser
AA seq
762 aa
AA seq
DB search
MADDESRGSKLQVANARPEDSGRGLAHIPRSLMGVLGITEGDVIEIIGKRATPARAVLPY
AEDEGLELLRIDGLQRANAGVGSGDFVEVRKAVSKPAARVVFAPAQANLRLQGSSAALQR
TFYGRPLAQGDIVATAGHHRVVDPNVQRWVSAPAYALQEIRLLVVSATPKGIVHIDENTE
VELRAEYEEAAESRRADVTYDDIGGMAATIDQLREMVELPLRYPELFQRLGVDPPKGVLL
HGPPGTGKTRLARAVANESDATFHLINGPEIMGSAYGESESRLRQVFEEAAKSAPSIVFI
DEIDSIAPKRGQVSGEAEKRLVAQLLTLMDGLEARANIVVIAATNRPEAIDEALRRPGRF
DREIVVGVPDERGRREILGIHTRGMPLGDRVDLGELARTTYGFVGADLAALTREAAIEAI
RRLMPRLNLEDHTIPPEVLDTLSVVREDFLEALKRVQPSAMREVMVEAPRIRWEDVGGLD
DAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIATK
SSDLLSKWYGESEQQIARLFARARQVAPCVIFIDELDSLVPARGGGLGEPQATERVVNTI
LSEMDGLEELQSVVVIGATNRPNLIDPALLRPGRFDELVYVGVPDRAGRERILHIQTEKM
PLASDVDLGEIAARAERYTGADLEDVVRRAGLVALRESLQTKHVTMAHFEAALADSRATV
TPEMEDEYEAMQGRLKQQASAIQPLGFIAPGTLRGRGPKGAD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacgacgaaagcagaggaagcaagctccaggtagccaatgcccggcccgaggac
agcggccgcggtctcgcgcacattccgcgctcgctgatgggcgtgttgggcattaccgaa
ggcgatgtgatcgagattatcggcaagcgcgccacccctgcgcgcgccgtgctgccctat
gccgaggacgaagggctcgagcttctgcgcatcgatggcctccagcgcgccaatgccggc
gtcggctcgggcgatttcgtcgaagtgcgcaaggcagtgtcgaagccagcggctcgcgtg
gtgttcgcgcccgcccaggccaatctgcgcctccagggctcctcggccgcgctccagcgc
accttttacggccgcccgctggcccagggcgacatcgtcgccaccgccgggcatcatcgc
gtcgtcgatcccaacgtccagcgctgggtcagtgcgccggcctatgcgcttcaggaaatc
cgcctgctggtggtttcggcgacgccaaagggcatcgttcatatcgacgagaataccgaa
gtcgaattgcgggctgaatatgaggaggctgccgagagccgccgcgccgacgtcacctat
gacgatatcggcgggatggcggccacgatcgaccagctccgcgagatggtcgagctgccg
ctgcgctatcctgagctgttccagcgcttgggcgtcgatccgcccaagggggtgctgctc
catgggccgcccggaaccggcaagacgcggctcgcgcgggcggtggccaatgagagcgat
gcgaccttccacctgatcaacggccccgagatcatgggctctgcctatggcgagtccgag
tcgcggctgcgccaggtgttcgaggaagcggccaagtcggctccgtcgatcgtgttcatc
gatgagatcgattcgatcgcgcccaagcgcggtcaggtctcgggcgaagcggagaagcgc
ctcgtcgcgcagctgctgacgctgatggacgggctggaggcgcgtgccaatatcgtcgtc
atcgccgcgaccaatcgccccgaggcgatcgacgaggcgctgcggcgtcccggccgcttc
gaccgcgaaatcgtggtcggcgttcctgacgagcgcgggcgccgcgagatcctgggcatc
catacccgcggcatgccgctgggcgaccgcgtcgatctcggcgagctcgcgcgcaccacc
tatggctttgtcggtgccgatctcgccgccctcacgcgtgaggcggcgatcgaggcaatc
cggcggctgatgccccggctcaacctcgaggatcatacgattccccccgaggtgctcgac
acgctgtcggtcgtccgtgaggattttctcgaagcgttgaagcgcgtacaaccgagcgcg
atgcgcgaagtgatggtcgaggcgccgcgcatccgctgggaggatgtcggcgggctcgat
gacgcgcagatgcgtctcaaggaaggcgtcgaactgccgctcaaggatcccgacgcgttc
cgccggcttggcatccgtccggccaagggcttcctgctctatggcccgcccgggaccggc
aagactttgctggccaaggctgtcgcacgggaggcggaggcgaacttcatcgccaccaag
tcgagcgacttgctgagcaaatggtatggcgagagcgagcagcagatcgcccggctgttc
gcccgcgcccgccaggtcgcgccgtgcgtgatctttatcgacgagctcgattcgctggtc
cccgcccgcggcggcggcttgggcgagccccaggctaccgagcgcgtggtcaataccatc
ctgtcggagatggacggactcgaagagctccagtcggtggtggtgatcggcgcgaccaat
cgccccaacctgatcgatccggcgctgctgcggccgggccggttcgacgaactcgtctat
gtcggcgtgcccgatagggcgggccgcgagcggatcctccacatccagaccgagaagatg
ccgctggctagcgacgtcgatctgggcgagatcgcggcaagggccgagcgctacacgggc
gccgatctggaagatgtcgtccgccgtgccggcctcgtcgcgctgcgcgaatcgctccag
accaaacatgtgaccatggcgcatttcgaagcggcactcgccgattcgcgcgcgacggtg
acgcccgagatggaagacgaatacgaagccatgcagggtcggctcaagcaacaggcctcg
gcgatccaaccgctcggcttcattgcgccggggacgctccgcggccggggtccgaagggc
gcagactga
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