Sphingomonas sp. LM7: BXU08_14935
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Entry
BXU08_14935 CDS
T04824
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BXU08_14935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splm03400
]
BXU08_14935
DNA repair and recombination proteins [BR:
splm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BXU08_14935
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AQR74777
UniProt:
A0A1S6FMJ1
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Position
3184354..3185118
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AA seq
254 aa
AA seq
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MASPAPSIIRVIDLETTGQAPPTHGVCEIGWQDVALQPDGRWDIMGEGGNRMVNPGRQIP
PLTMAIHHIRDEDVADAPYWHDVARPVLDPWPRRVALAAHRADFEQQFCTASLTRGADWI
CTWKCAMRLWPSSPGFSNQMLRYWRKPAGMEHERGLPAHRAFPDAYVTAFHLRDMLNEAS
VEQLIAWSKEPGLLPRVRYGPDRGKEWSEIEDESLAVFLGDRDIDVRHTAEQEYMRRTGG
GAVGRNSANQDLLL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacccgccccttccatcatccgcgtcatcgatctcgagaccaccggccaggcg
ccgcccacccatggcgtgtgcgagatcggctggcaggacgtcgcgctccagcccgacggc
cgctgggacatcatgggcgagggcggcaatcggatggtcaatccgggacgccagatcccg
ccgctgacgatggcaatccatcatatccgcgacgaggacgttgccgacgcgccctattgg
cacgatgtcgcgcgtccggtgctcgatccttggccgcggcgagtcgcgctggccgcgcac
cgcgccgatttcgagcagcaattctgcaccgcctcgctcacgcgcggcgcggactggatc
tgcacctggaagtgcgcgatgcggctatggccgagctcgccgggcttttcgaaccagatg
ctgcgctattggcgcaagcctgcggggatggagcatgaacgcggcctgcccgcgcaccgc
gccttccccgacgcctatgtcacggcattccacctgcgcgacatgctcaacgaagccagc
gtcgagcaattgatcgcctggtcgaaggagcccgggctgttgccgcgtgtccgctacggc
cctgatcgcggcaaggaatggagcgagatcgaagacgaatcgctcgccgtcttcctgggc
gatcgcgacatcgatgtgcgtcacaccgccgagcaggaatatatgcggcgcaccggcggc
ggcgcagtcgggcgcaattcggcgaaccaggatctgctgctttag
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